1. Home
  2. Mutant Lines
  3. GT15336

GT15336

CSHL Arabidopsis genetrap mutant lines

Original: GT15336

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15336

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18082467 [Map]; Strand: c
      • AT4G38730.1 - [+] show detail - Protein of unknown function (DUF803)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15336 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAA 
    CAGGAGGAAG GAATGAGAAT CGCAGGATTT TTGGAGTCGT GGTGAAATAA 
    TTCAAATGGG GGGAGAGAGA GAAAGAGAAA GAGAAATCCC CCATTCCTCC 
    TCTCCAGAGA CGACAGCTCA TGAGAGATTT CGTCGTCTTT TGTCGGAAAC 
    TATTAAAATA TAATATAAAT CTGCTGCTTC GCGGACCACC TTCTTATATT 
    AGCCAGTAGC CATCCGTCCG CTTCTTCATT TCTGTTGTTA ATCAAATCTT 
    TAATCCTTGT TTATTTATAG ATGTAAGATG AGTTCTTTAA TCCTTGTACA 
    CAAACGTGAA ATCTTCCAAA AAATGAAATT TGTGTTAACA AGCAAATAAA 
    TCACAGCAGC TATACTATTT TCATTTTTGG CTTTCACACG TATTGGCTTC 
    CCTCACAATT ATTTTATTCT GAAATCGTAA TTAAAGGCAT ATGCGTCCCT 
    GCTGGCTGCA TATAAATATG AGATTCAGTC TTCTCTGAAA CATTTATTTG 
    ATTTGGTAAT TGGTATGTCA TCAATCA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 11347236 [Map]; Strand: w
      • AT2G26690.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon7 (3UTR)
    Flanking Genome Sequence: GT15336 - 5-prime edge 
    AAAAAAATTA TTTTTCACGA TGCAAAAAAA AAGGGGGAAT AATTTAAACG 
    GGAAAAACAC AATCTTTGAG ACCGGGAGGA TTTTAAAAAC AGGCCAATTG 
    TTTAATATCC AAAAAACATA ATTGGAAAGG GACATTGTTG CTTGATAAAA 
    TTGTACACAA AAAAATTTTT GCAAAAAAAA TTTCAGAAGT CTTCATTTGA 
    AAATCCCTGG CCATTTTCCT TCTCTACGGA GGGTTAACCA TTCTTTGGCT 
    TAAACCCCAA GGAACTTTTG ATTTAAACAC CAAAATAAAT TCCCCTGAAA 
    TTGCCTAAAA GCCAATAAAA GA

AT2G26690.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: response to jasmonic acid stimulus, response to wounding; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.1 (TAIR:AT1G12110.1); Has 7265 Blast hits to 7134 proteins in 1412 species: Archae - 0; Bacteria - 3658; Metazoa - 494; Fungi - 438; Plants - 2171; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38730.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF803)
Computational Description
Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT2G21120.1); Has 1281 Blast hits to 1255 proteins in 234 species: Archae - 0; Bacteria - 123; Metazoa - 451; Fungi - 355; Plants - 247; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
Link
InterPro Scan - TAIR