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GT15350

CSHL Arabidopsis genetrap mutant lines

Original: GT15350

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15350

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18082467 [Map]; Strand: c
      • AT4G38730.1 - [+] show detail - Protein of unknown function (DUF803)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15350 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAA 
    CAGGAGGAAG GAATGAGAAT CGCAGGATTT TTGGAGTCGT GGTGAAATAA 
    TTCAAATGGG GGGAGAGAGA GAAAGAGAAA GAGAAATCCC CCATTCCTCC 
    TCTCCAGAGA CGACAGCTCA TGAGAGATTT CGTCGTCTTT TGTCGGAAAC 
    TATTAAAATA TAATATAAAT CTGCTGCTTC GCGGACCACC TTCTTATATT 
    AGCCAGTAGC CATCCGTCCG CTTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6128010 [Map]; Strand: w
      • AT3G17900.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -496; Region: promoter
    Flanking Genome Sequence: GT15350 - 5-prime edge 
    CGAAAGATTG TGCTCGTGAA AATTAGATTT TCTCGATTTT GGCAGCTAAA 
    AGGACCGAAA GCACCACTTT TTCAAGCGCA TCAGTGACGT GCTGCCTTAA 
    CTAACTCAAT CACAAACCTA AAGATAAAAA TCTCAAAGAG CTTGAGAATC 
    AAAGACACTG ACTAACTTGA ATATTCCCAC AGTTACGATG GCTATTATTG 
    GTTAAGAGTG GGGATGGGTG TATATATAGT GACGGCCACA TGTAGAAAAC 
    CCTAGTTGAT CTCTTTGTAG GGACTAATAA TGGGCTTGTT TGTTATTTCC 
    TTTATTGGGC TTGTAAGAAT AAATCACTTG GTCTTAGTAG TTTGTAAGTT 
    AGTGGTTACG TCCACTCAAT GAATGTCTTT GTAATTGTTA GTGGCTAACA 
    AAAATGAATG TGAAGCATGC TTAAGAAAAC AAGGCAAAAT GTAAAAATGA 
    GAAGAAGAGA ATCAATAAAG ACATTTACCC TCCTAATCAA TCTTTCATAA 
    ACTGTATATG AATTTTTTTT AGGGGGTTTT CTGACCCCAA CAGAATTTAA 
    AGTAAAATAA AATTGATCAT ATGAAAGTTT AAGGAATAAT TAAACAGGTT 
    GTATCGCCGG AGGTTGTTTC CGTTTACCTC TCTCACACCT ATTTCTCT

AT3G17900.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 44 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38730.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF803)
Computational Description
Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT2G21120.1); Has 1281 Blast hits to 1255 proteins in 234 species: Archae - 0; Bacteria - 123; Metazoa - 451; Fungi - 355; Plants - 247; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
Link
InterPro Scan - TAIR