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GT15358

CSHL Arabidopsis genetrap mutant lines

Original: GT15358

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15358

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10490502 [Map]; Strand: w
      • AT2G24660.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT15358 - 3-prime edge 
    ATTTTGCTGA ACCAGAATCT GTTACTAAAC CGGACGATTT TGCTGAACCA 
    GAATCTGTTA CTAAACCGGA CGATTTTGCT GAACCAGAAT CTGTTACTAA 
    ACCGGGCGAT TTCGCTGAAC CAGATTCTGT TATTAAACCG GAGGATTTCA 
    CTGAATCAAA TTCTGCTCTT CAAACCGACT CTGTTTTCGA ACCAGACTCT 
    GATTCCGACG TGGCACCTGC TTCTATTGCT TCCGATTTAC AAAATTCACG 
    AGTTGATTCA TCTGATTCAT CGACGCCGGA TAAGAATCTT GCTTCTGGTG 
    ATACTTTGGC TCAAATTGAT GATTCTCCTG ATATTGTCTC AACTCCTAAT 
    CGTAATAATC AGCCATTGTT CGTTGTTGAC AGTCCGTTTG TTGAAGCTAC 
    GTCTCCTCGT CAAAGA

AT2G24660.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.7e-166 P-value blast match to GB:BAA78424 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996363|dbj|BAA78424.1| polyprotein (AtRE2) (Arabidopsis thaliana) (Ty1_Copia-element)
Link
InterPro Scan - TAIR