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GT15416

CSHL Arabidopsis genetrap mutant lines

Original: GT15416

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15416

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4120224 [Map]; Strand: c
      • AT1G12130.1 - [+] show detail - Flavin-binding monooxygenase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT15416 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTATA 
    TGTGAACGTC GAAGATAACC GTGTTGGACC ATTATACAAG CATGTGTTTC 
    CACCGGCGCT TGCTCCTGGC CTTTCCTTTA TCGGTTTACC TTCCATGGTT 
    AGTAGATTTT ATATATATAT ACAACTGATT ATGATGGTAT TATTTCTTTG 
    ATTCGAATTG ATCTTGTACG TAATCTTTGA TTTCTCATTG GACTCATTAC 
    TTGGTTTGAA CTTTGTTCTT GATCCAGGCA TTGCAATTCT TTATGTTTGA 
    AATCCAAAGC AAGTGGGTCG CTTCGGTTTT ATCGGGTCGG GTTAAACTTC 
    CCTCAGAGGA GAAAATGATG GAAGATGTTA TAGCTTTCTA TGCAAAGCTT 
    AAATCTTTGG GTATTCCCAA GAGATTTACT CATTTTCTAA CTGATCCGCA 
    ATGGACTCCA ATGTTCGAAA AGCTTAAGCC GCATGAAGCA GTTTTGATCT 
    CACAAAGTGA GTATTTCAAC TGGATTGCGG AACAATGTGG TTACTCGTCC 
    ATCGAACGCT GGAGAGAGGA ACAATACAAT ATAGCCATCA AAAAAGATGA 
    TGACAATTTT CGTGATGAAT GGGATGATGA TGATCAACTT ATACAAGAAG 
    CGTACCGGGA TTTTGCTAAA TTCATACCGA ACAAAGTTTG GTCTACATAA 
    ACCAATCTTT CCAAAGAAAA TGCACTTCGA AGATCCAAGA GTTGATATTC 
    CCATGTTGAA ATGAATAAAG GTTGAAAAAA CTTTTTTGCA GTCCAAAAAT 
    AAAATGAAAA TGTCTTCGGT TGGTTCCAAT TCCAATCTAA GGGTGATTGG 
    CAAAGTTTGA CTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4120084 [Map]; Strand: c
      • AT1G12130.1 - [+] show detail - Flavin-binding monooxygenase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT15416 - 5-prime edge 
    GGTGCCATGT ACTATGGCAT CCGCAAATAT CAGTTTCCCG TCTTGGAAAA 
    CAACCGAACC ATCCTCATAC ACTCGCTCAA TCTATAACAT ATCAGGGTGG 
    TTGGCCGAGG AAGAAATCAA GTAATCATAT ATTAAAATTA AATGGTGTTT 
    TTGTTATTTT CTCTGTTTTT ATGTTTTCAT TATTTACTTA CCGTCGGATG 
    AAAATGTAGA TTGCTATAAA TCGAACTTTC CTTTGCGTAT GCATCAGATT 
    TAGCTGCAAT ATGGACTTCT TTTGCTAGGG TTGCTATGTC CCTACTAATA 
    TCACTTCCAC TGGATTGATA TCCTATCACT ATCACCACCT ACACATCTCA 
    AACAATAACA TTGTTAATCT TAACCTAATC TATACTATAA CAAAACATTT 
    AAAAAACTGA AAAGACGATA TAGTCAAAGT AATTTGTGGA CTTCTGTAAA 
    TTACTTGATC TTTGAATGGA TCTGAAACAC GATAATTGTG GCTATGGATT 
    TGCCTTCCTG GCCATGACTC TATTCCTGAA ACAAAAGAAA TTACAAAACA 
    TTCTCGCCCT TAACATTCAC ACATTGGGAT TTCAAAATGA GTTATTAACT 
    CCGATTACCT CTGATTAATA GTGAATTAGC TAGTGGAATA AGACTTTTTC 
    TTATAGTTAA AAAAACATGT AAAAATATGG

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT15416 - 5-prime edge 
    AATGTACTAT GGCATCCGCA AATATCATTT TCCCGTC

AT1G12130.1

Model type
Protein coding
Short Description
Flavin-binding monooxygenase family protein
Computational Description
Flavin-binding monooxygenase family protein; FUNCTIONS IN: NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G12160.1); Has 14567 Blast hits to 13953 proteins in 1841 species: Archae - 71; Bacteria - 7478; Metazoa - 1324; Fungi - 1597; Plants - 844; Viruses - 0; Other Eukaryotes - 3253 (source: NCBI BLink).
Link
InterPro Scan - TAIR