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GT15435

CSHL Arabidopsis genetrap mutant lines

Original: GT15435

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15435

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7609149 [Map]; Strand: w
      • AT1G21660.1 - [+] show detail - Chaperone DnaJ-domain superfamily protein
        Distance: 84; Region: intergenic
      • AT1G21670.1 - [+] show detail - LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structure...
        Distance: -1249; Region: intergenic
    Flanking Genome Sequence: GT15435 - 3-prime edge
    CGGTAGAGGA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAAACGTA 
    CATGTTCATG AAGATACCAT CAAAAGCATT TTGTTATTCC ATAGGAATGA
    AACTAACATC AGTGAATCAT CTCTACGCTA TAAGCTATTA TAATAAAAAC
    ATTCAATATA TATCTTATAA AAAGAAACTC TATTTCGGTT TTTGGGGCTA
    TACAATATCC CCCATGGATT TTTGTTGTTG GGTGTACAGA AAGATGACAA
    GTTACGGTCA AAGGAAAAAA TCATAAACAA GAAGATTAAA AACAAGAAAA
    GACTCGAGGA AACTCACAGA CGAATTATAG TTGTACAGAG AGCAACTATA
    TTCACAGTAT ATGGGCTTAA GAGAGCTCCT CCTTGTTGAA CTTGTTCCAA
    GCTTCCTGTA CAAGGCAAAT CAGTTACGAG GTCAGGTTAG CGGATCTATG
    CAAGAGACAA GAAACTAAAC CGGAGGCCTT CAAATTACTA ATACAGAGTA
    ACATCCAACC TACTAAATCA AACATCGTTT CCATGAAACT CTACTGATCG
    ATTTGGAGGG AACTAAACCA TCAAGTCAAC TTTCGTCTAC ATAGGCTTTT
    AGAAAGGGAG CTACTCATGA AGATCCATTG AGGAAATACC TTCAAAATGT
    CAAAAACCTT TTCGGCGATA TACTTTTGTT CAAGGGTGGC TCCTTTCTGC
    TGAACTTTAT CGGGATGGAC ATACAGTGTT GCCTTTCTAT AGACTTTCTT
    GACTGCTGAC GAAGTGATCA AATCTGTTAT GGAAACAGCC TCCCAACCAC
    ATCCGGGCCA GAGTACCTGT CATCCGAACC AGAACTCAGA GTGAACTTAG
    GAGGATCACA TGGATAGACA GATGTAAA
  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT15435 - 5-prime edge
    GTTATGCGAG AGCAAATGTT CGAGG

AT1G21660.1

Model type
Protein coding
Short Description
Chaperone DnaJ-domain superfamily protein
Computational Description
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.1); Has 3482 Blast hits to 1316 proteins in 282 species: Archae - 0; Bacteria - 662; Metazoa - 522; Fungi - 399; Plants - 281; Viruses - 8; Other Eukaryotes - 1610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21670.1

Model type
Protein coding
Computational Description
LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: DPP6 N-terminal domain-like protein (TAIR:AT1G21680.1); Has 8461 Blast hits to 5060 proteins in 1257 species: Archae - 79; Bacteria - 5567; Metazoa - 37; Fungi - 70; Plants - 117; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink).
Link
InterPro Scan - TAIR