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GT15436

CSHL Arabidopsis genetrap mutant lines

Original: GT15436

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15436

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7609149 [Map]; Strand: w
      • AT1G21660.1 - [+] show detail - Chaperone DnaJ-domain superfamily protein
        Distance: 84; Region: intergenic
      • AT1G21670.1 - [+] show detail - LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structure...
        Distance: -1249; Region: intergenic
    Flanking Genome Sequence: GT15436 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACTCGG 
    GACAGCCTAG GTGGATCCAT GCTTTCCAAC GAAGCACGCC CATCCAACCT 
    AGGCGAGACA AGGGTTCACA TTTCGTTCAT CTCACTCGAC AAATAAAAAC 
    ATTCAATATA TATCTTATAA AAAGAAACTC TATTTCGGTT TTTGGGGCTA 
    TACAATATCC CCCATGGATT TTTGTTGTTG GGTGTACAGA AAGATGACAA 
    GTTACGGTCA AAGGAAAAAA TCATAAACAA GAAGATTAAA AACAAGAAAA 
    GACTCGAGGA AACTCACAGA CGAATTATAG TTGTACAGAG AGCAACTATA 
    TTCACAGTAT ATGGGCTTAA GAGAGCTCCT CCTTGTTGAA CTTGTTCCAA 
    GCTTCCTGTA CAAGGCAAAT CAGTTACGAG GTCAGGTTAG CGGATCTATG 
    CAAGAGACAA GAAACTAAAC CGGAGGCCTT CAAATTACTA ATACAGAGTA 
    ACATCCAACC TACTAAATCA AACATCGTTT CCATGAAACT CTACTGATCG 
    ATTTGGAGGG AACTAAACCA TCAAGTCAAC TTTCGTCTAC ATAGGCTTTT 
    AGAAAGGGAG CTACTCATGA AGATCCATTG AGGAAATACC TTCAAAATGT 
    CAAAAACCTT TTCGGCGATA TACTTTTGTT CAAGGGTGGC TCCTTTCTGC 
    TGAACTTTAT CGGGATGGAC ATACAGTGTT GCCTTTCTAT AGACTTTCTT 
    GACTGCTGAC GAAGTGATCA AATCTGTTAT GGAAACAGCC TCCCAACCAC 
    ATCCGGGCC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7190896 [Map]; Strand: w
      • AT2G16586.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; H...
        Distance: -41; Region: promoter
    Flanking Genome Sequence: GT15436 - 5-prime edge 
    CCTACTTTCT CCCTGGTCCC GAGTGTGAGC GAGGTGTGAG TGTCGCCCAT 
    GGGCATCGAC ACCTTGCGGC TAGGAACTGG AACGAGACGG GTAGCAAAGA 
    TTTCGAGTAG CACTTCATAC TACCGTGGGT TTTTTAAACC TTCCTAGTTT 
    TGTTGATGTT ATTCCGAGAA TTAGCAAACC GTAACGAAGA TGTTCTTGGC 
    AACCATCTTT TGATGGGAGT CCGGCTGTTC GAAAGCCGGC CAAGGGTGAT 
    GAACGAAATG TGAACCCTTG TCTCGCCTAG GTTGGATGGG CGTGCTTCGT 
    TGGAAAGCAT GGATCCGCCT AGGCTGTCCC GAAGGTATCT CGCGCTTGTA 
    CGGCTTTGGC TCGGATTCGT CCGTCTTCTT TCTTCTTAGN CCCGAGTACT 
    TCGGTAGATT AGTTGGAACG ATTGATGATT TTGAGTTAAT TGAACGTTCG 
    GCGTATGAGT GGTGATCGGA TAGCTAGTGT TCGTAGGCTC CATGCTCGCG 
    CATCGAACTA CCTACCACCT ATCCTTCTCA GTTAATTCAC GGGCGATGTT 
    ACGCTCGATG ATGAGTTCCG GGGCCTGTGT TTCGTACCTA ATTTGAAGGA 
    ATTGTTGAGT TTGGTTTACA CCTTTGCCCG CGGCTTCTCC TTCGTGGGGA 
    AGTCGTGGGC ACAAACATCG GCGCT

AT1G21660.1

Model type
Protein coding
Short Description
Chaperone DnaJ-domain superfamily protein
Computational Description
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.1); Has 3482 Blast hits to 1316 proteins in 282 species: Archae - 0; Bacteria - 662; Metazoa - 522; Fungi - 399; Plants - 281; Viruses - 8; Other Eukaryotes - 1610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21670.1

Model type
Protein coding
Computational Description
LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: DPP6 N-terminal domain-like protein (TAIR:AT1G21680.1); Has 8461 Blast hits to 5060 proteins in 1257 species: Archae - 79; Bacteria - 5567; Metazoa - 37; Fungi - 70; Plants - 117; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G16586.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR