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GT15441

CSHL Arabidopsis genetrap mutant lines

Original: GT15441

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15441

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5538507 [Map]; Strand: w
      • AT2G13350.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: -626; Region: promoter
    Flanking Genome Sequence: GT15441 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAAATT GGACGTCGTT 
    ATTTATGAAC CATGGCTACG TACGTACGGA TAGCTAGAGT AAACCCATAG 
    CAAACCAACG GTAAATATTT AGACATAATA GCACTTATTC TTATTCAATC 
    AACTAATATG GCTATATATG GACATTGACA AAAATTTTGT AGCCATATCA 
    TATGATCATA AGTATGATTT GACCATGCCT AAAAGATTCT ACCATAGACA 
    GTTCACCGAT ATTCCTAGCA AAATGGAAAG GGATGGGTTA AGAAGTTGGA 
    GCAAAGGTTT TAGTGGACGT AAAGAATTCT AACTATCAAT TTGAACTCGT 
    AAGTTTTGTT ATTTTGATTT TGTTTTTTGT ACTAGCAATC TTTTACTTTC 
    TTAGAACGC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5538609 [Map]; Strand: w
      • AT2G13350.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: -728; Region: promoter
    Flanking Genome Sequence: GT15441 - 5-prime edge 
    TACTTTACCC AATCTTTTTT AAAAGAAAAT GCTATGCAGT GGAAGTATTC 
    ATCATGATGT ATAAAGATTA AATCTGTTGA GTAATAGCGG ATCGAAACTC 
    ATTGATAATT TAACTCAATT TTTTTAGGTT TGGCTAAAAG TTGGGTGTTA 
    CATAACGTTC ATACAAAAGA AGAGATAAAT CTATTTTGTC AATGGTCGAA 
    GTGTTTAAAC TAAAAGCGTT AAGACGCACA TACATTTTAA AGAATTTCAA 
    TATTTCTTAT TAATATGGAG GTTGTATATG CAGAACATTG TGATTACTGA 
    CTAGGCATAA AAAAGCTATT TCCAAGAGTT TTCCTTTTGT TGTCACAGAT 
    AAGACCCCTC TTGAAATAAG TCTTCTTGAT TCATTCCGCC AAATGTAGAC 
    CTTTCATCTC A

AT2G13350.1

Model type
Protein coding
Short Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description
Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT2G33320.1); Has 331 Blast hits to 320 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 329; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR