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GT15452

CSHL Arabidopsis genetrap mutant lines

Original: GT15452

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15452

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24651900 [Map]; Strand: w
      • AT1G66180.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 3087; Region: intergenic
      • AT1G66190.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 895; Region: intergenic
    Flanking Genome Sequence: GT15452 - 3-prime edge 
    TTTCCGACCG TTACCGACCG TTTTCATCCC GCCAATGGGA TGGATAAAAT 
    GTAGCTATGA TGCTTCACAT CATGAAGGTG ATAGAGTTTC AGGCACGGGA 
    TTGGATCATT CGTACGTAAT ACTAATGGAC CAGTTCCTTA ATAACCAAAC 
    AAGCTTGTTA TACTTCAAAA TATCAAAAAC TCATTCTTAT TTAGAGGTCT 
    GAAACATATA TCTTAGCTGA AAACACCCTC TACTTAAACA CTAACAAAGA 
    AAGAACCCAT AAACGAGTCT TTGTACATTT TTAATAATAT AAACAGAAAA 
    AGGTTTCTCG TAGAACAAAC GTGTATTCTC CATTAGGATC ATTTGTTTCT 
    AACTTTTTGA TAGTTGAATT TGAAACTGGA ATCATACCTT ACCTATTACA 
    AAAAGAACTA TTTTTAAAAC ACTTGCCCAT TGAAAGTAGA AAGAAAATAA 
    CGAAATATTA AAAAAAATAT GTATATGTCA TGAAAA

AT1G66180.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G37540.1); Has 1897 Blast hits to 1884 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 164; Plants - 1696; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G66190.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G37550.1); Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 7; Plants - 19; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR