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GT15454

CSHL Arabidopsis genetrap mutant lines

Original: GT15454

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15454

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4653419 [Map]; Strand: w
      • AT3G14050.1 - [+] show detail - RELA/SPOT homolog 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15454 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTACC 
    TCCAGGAGTT CGTCAACATC CTCTTCCATG GCTTCCTCGC CGCAGAAACC 
    AATCGTTGGA GGTCTCTCTT CACTTTTCTC CAGCGCATCA GTCAAATCTT 
    CATCTTCTTC CTCTTGCTCA TACTCAACCG CAGTAGATGA GTTCTCTTCA 
    CTACGCTATG ATCGGAGTGA TGATTTGAAA GATCTGAGCT TTAGCAGCTC 
    CTTTGGTTAT TCTCCGGCGA AATTTGTGAA TTCATTTAGA CGAGATCACC 
    AAAGCCCTAT CTCTGTGCTT CATGGTCCGG TCTCGTGTAG TTGTAGCCCT 
    CCGATGAGAA TGTCTCGTGA TCGGAATCTA GATGGTTCGT TTCGTTTAGG 
    AGCTAGTGGA TTGTTCAATG GTTTCGTTAG GAAAGCTCTT GGATCATGTG 
    TTGATTACGA GTTGGGATCG GATTCTGTTC TCGTTGATGA GCTAACGTTT 
    CCTATGGAGG TTGATACGAT AAAGCCATAT GCTAGGGATT TGCTAAGACG 
    TGCACAATTG AGACACAAGA TTTTCAATGA TGAATCTGTG ATCAAAGCTT 
    TTTATGAAGC AGAGAAAGCT CATAGAGGAC AAGTAAGTAG GAAAAGATAC 
    AATTCTCAAT CACTAGTTTT AGATTCTTGT TTGGTTTTAG TGTGACTCAA 
    CTTTTCGTTT CATGTGTGTT ATATCAGATG AGAGCTAGTC GTGATCCTTA 
    CCTTCAGCAT TGTGTTGAGA CTGCTA

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4653532 [Map]; Strand: w
      • AT3G14050.1 - [+] show detail - RELA/SPOT homolog 2
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15454 - 5-prime edge 
    ACAAACGTTG CTTGGTGGAC TCACGTAAAG TGCTATAGTC GTCGCCACCA 
    CCATTGGAGC TCGTTGGTTC TGCTTTATAA TCCTAAAGTT CAGTTTTTTC 
    TCTCTCAGAA ATCAAAGAAT AAAAAATATC CAAAATTCCC AGAATTAGCT 
    CCCAAAAATC GTCAAATATC CCGGGAAATT AAAGTCACCG TTTTTCTATT 
    GAAACAAACA GATTAACACA AAACCCACAA ATTCTAACAC GAAACGCAGA 
    TGGATTTTGA GTTGTACAAG GAACTTTAAT ACAGAGGAAG AACAGAACAA 
    AGCCTAAAGT ATGTACAATT TATACGAGTT TGGAAAGAAA TTGAAGAAGG 
    GGAAAAATCG TAGAAACGAT TCTAATGGAG ACAAGAGGGT GTGTGAGGAG 
    GAAGAAGGAG AAGAAGAAAG TTAGACGCTT TTGCTTTAAG GACGAAAATT 
    AATCTTT

AT3G14050.1

Model type
Protein coding
Short Description
RELA/SPOT homolog 2
Computational Description
RELA/SPOT homolog 2 (RSH2); CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 12447 Blast hits to 12322 proteins in 2456 species: Archae - 4; Bacteria - 8610; Metazoa - 164; Fungi - 55; Plants - 218; Viruses - 2; Other Eukaryotes - 3394 (source: NCBI BLink).
Link
InterPro Scan - TAIR