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GT15483

CSHL Arabidopsis genetrap mutant lines

Original: GT15483

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15483

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 95795 [Map]; Strand: c
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15483 - 3-prime edge 
    GTAGAGGTTT TTACCGACCG TTACCGACCG TTTTCATCCC TAGCAGAGCG 
    TGAGGCCAAT CCATCCAAGC CTTGGCACCA AGACTCTTCG TTGGAACCGG 
    CTAGGGGAGA CAAGCCCTAC ACGGTGGATT GCATTGTCAA CACTTCACTT 
    AACACACATA AAAACTCAAC TACTTATGAT GATGATGACA GAATAAATGG 
    ATAAAAAATA CCTTGTCAAC TTTGATGCCA GGGACGATGT TGGCATCGCG 
    CAAGCAATCG ACAAAGGTCT TACCGTCCTT GGTGGACTGG TAAAGAGTCT 
    CCTCGAAGAG AATGGAACCA GAGATGTAAT CGCCGAGGCC AGGAGTGGTA 
    AGCAGAAGTT GCCTGTAGGC CTGACGGTTG TCCTCGGTGT TATCCAAGCC 
    GATAGAAGCA AGCCTCTTCC CACAGGTTGC ATTGGACTCA TCGATCGCCA 
    AGATACCTCT CCCAGGGGAT GCAATGCTTT TCTATTACGC AATAATCAGA 
    GAATCTCACT CTACGTTTGA CTTTGAGAAT TACGGAAACG AATCCAAACT 
    AATAAAGCAT CAAAGAGAGA GAGAGGATAA GGAGGATACT CACGGCGGTT 
    TTAACAAGCT CGTCGGAGTA AGCACCGGCG CGGATCGCGA AGGAGACTCG 
    AGGAGGAGGA GAAGAAGAAG CAGAGGTGTG AGCAAAGGAG CGTTGGCCGA 
    TCCATGGAGA AGAGAGGGTG TTAGGCTTAA CGAAGCTAGC AGACGCCATA 
    GGTAGTACAA GGAAGGTACA AAAGTGATGG TGATCAATCT CTCGGGGACT 
    CCGCGGGAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 95722 [Map]; Strand: c
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT15483 - 5-prime edge 
    GCGCTCTGCT GAGTACTACT GGCAAGGTGC TCGTTTTGCC AAGTGGTATG 
    TCATATATTT CACCATGTTA TCTTACATAT GGTATTAACT CTTTGGTTTG 
    ATGTGAAAAT GCTCTTCCTA GTTTTGATGT AGACTCTTTG GAATATATGT 
    ATGTGTGTGT TTGTCTAGGA GGACAGTGGT GAGTGTTCCC TGCGGTCCTT 
    CAGCACTGGC TGTGAAGGAA GCTGCGTGGG GGCTGGCTCG CTATGCAGCC 
    ATCTCTCAGG ATAATGGTCT TGTCCCCATT GTGGAGCCAG AGATCCTTCT 
    GGACGGGGAC CACCCAATAG AGAGGACTCT GGAGGTGGCA GAAAAAGTGT 
    GGTCAGAGGT GTTCTTCTAC TTGGCACAGA ACAACGTCAT GTTTGAGGGT 
    ATTCTGTTGA AGCCGAGCAT GGTCACCCCA GGCGCTG

AT2G01140.1

Model type
Protein coding
Short Description
Aldolase superfamily protein
Computational Description
Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink).
Link
InterPro Scan - TAIR