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GT15511

CSHL Arabidopsis genetrap mutant lines

Original: GT15511

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15511

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 13054717 [Map]; Strand: w
      • AT2G30650.1 - [+] show detail - ATP-dependent caseinolytic (Clp) protease/crotonase family protein
        Distance: 0; Region: intron9 (CDS)
    Flanking Genome Sequence: GT15511 - 3-prime edge 
    ATGAAACGGT AGAGGATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    TGTATAATTT TGCCGAATAT ATATTTTCCA TGCCAACATC GCAAGCATAG 
    TAAGTCAATT GTAAAAACAT TTTCTCCGTA TTGTTTATTG ATCATGATCA 
    TGTATTGGCC TCATCTTTCA ACTGCTCTTG ACAGGATCTT GAATTTTCTC 
    CCTAACGCAG GTTAGATGTT ATTGATAGGT GCTTCTCGAA AAGAACAGTG 
    GAGGAAATTT TCTCTGCACT TGTAAGTTTT TCATTAATAG ACAGCATATG 
    TTGACTTGTG AGTTCCGATC ATGAATCATG AGTTCACTGA GTTACCTTTG 
    ATATTGCGCT CTACCATCAT GTGTTGATTA GGAGAGAGAG GTCACACAAA 
    AACCAAACGA TTGGCTCTTA GCTACCATTC AAGCATTGGA GAAGGCTTCA 
    CCATCATGCC TTAAAATCTC GCTAAGATCG GTTAGTTCCC AAAATCTGTC 
    ACATGTAATA ATTGCAGAAA GCTAACAATG TGTATGAAAT TCAGATAAGA 
    GAAGGAAGAT TGCAAGGGGT GGGGCAGTGT CTTATCCGTG AGTATAGAAT 
    GGTGTGTCAT GTGATGAAGG GAGACATAAG CAAAGACTTT GTGGAGGTTT 
    TGTCAGCTTT TCCGATTGTA TCTACATCCT GAAACTGTCC TTTGTAGACC 
    ATAATTACAA GAACGTGTCT TACTTATGTA GGGGTGCAGA GCAGTATTGA 
    TAGACAAAGA TAGGAATCCA AAGGTTTAAC AAAACTTTCC ATTTATTATT 
    TTTTGCTATG TCATATTGTT T

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT15511 - 5-prime edge 
    TAAAGGGGAA CACATATAAA AGCCAAAAAA CCCTTGGACG AAGTCATTTT 
    TTTTCCTTTA AAAAAAAAAA AGGGGTATTT TTTTTTTCTT GAAAAATTTT 
    TTCCCCCCTT TG

AT2G30650.1

Model type
Protein coding
Short Description
ATP-dependent caseinolytic (Clp) protease/crotonase family protein
Computational Description
ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: petal, leaf whorl, sepal, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: beta-hydroxyisobutyryl-CoA hydrolase 1 (TAIR:AT5G65940.1); Has 32067 Blast hits to 32054 proteins in 2254 species: Archae - 421; Bacteria - 21939; Metazoa - 1258; Fungi - 833; Plants - 620; Viruses - 0; Other Eukaryotes - 6996 (source: NCBI BLink).
Link
InterPro Scan - TAIR