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GT15524

CSHL Arabidopsis genetrap mutant lines

Original: GT15524

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15524

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4661848 [Map]; Strand: w
      • AT1G13608.1 - [+] show detail - Defensin-like (DEFL) family protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G13609.1 - [+] show detail - Defensin-like (DEFL) family protein
        Distance: -873; Region: promoter
      • AT1G13609.2 - [+] show detail - Defensin-like (DEFL) family protein
        Distance: -904; Region: promoter
    Flanking Genome Sequence: GT15524 - 3-prime edge 
    TCTTTTTGCA TGAAAATTTG ATTGATGGCC TCTTTCCCCT TGGCTTCCAC 
    CACAGAGATT TGAAACTGCC AATAAGAAAG TTTATTCAAC ACACAGTTCT 
    TGTATAAGAA ACAATAAACA AATTCAATTT GAGATTAAGA GAAAAAACTA 
    AGTACAAGCT AATTCGCAGT GAAGACAAGA GCGGCCAAAA ACACTGCAAT 
    GGTTAGGCGA AGATTGCTCA TTTTCTCCTA GCTCTTAACC GATTTCGTTT 
    GTAGAATTTG AGGTCTGAAT AACTATAGCT TAGTTTGCGA TGTAATAATA 
    TTGGAAGACT ACAATAATAG GCATATATAT AGAGCATTCT GGGGTCCAGA 
    AAGTTTCGTT GCCTAAAATG ATTTACTTTT GTCAATGTTT TCATTACATA 
    ACGCATATGT GAGTATATGT TACGTTTGTA ATGTCCGATT AAATTCAGAT 
    AATTCATTAA AATAAGGTGT CCTAAGAATC TATGGCTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4662040 [Map]; Strand: w
      • AT1G13609.1 - [+] show detail - Defensin-like (DEFL) family protein
        Distance: -681; Region: promoter
      • AT1G13609.2 - [+] show detail - Defensin-like (DEFL) family protein
        Distance: -712; Region: promoter
    Flanking Genome Sequence: GT15524 - 5-prime edge 
    CTTTCTCCCT GGTTTTGGTG GAGAAAGGAA AATCCCACAG CTGCGCCATT 
    AACTGCTTAA TTTCTCCATT TCTTTTTTAA ATTTATCTTT TGTTTTCTTG 
    TAATGCAAAT GGATAATTAA AAAGATTTCA GATCAAATTA TATCCTATTA 
    ATTATTTTAA ATCATTATAT TTTATCTCAT CTCTGCTTGA TCCTTTTACA 
    TAAAAATATA ATAATCACAT CATCCATATT TTTTTTCTGC ATTTGTACGT 
    GTTAAAAACT GCCACTAGTG ATTAAATCCG GAAGTTAATT TCAGGCAAAG 
    TTAATTTAGT TTTTTCCACC AATTTTTTAA TTATTAAATT GTGTTTGGTT 
    ATATGAATAA TACTAGGAAA AAGTATGAGA TATTTTTGCC CTTAATAAGT 
    GTCTTTTTTA AAAAAACAGC TTATTAATTA ATGACATTTA ATGTAAATCT 
    TAACACGTCC ATAACTATTT ACTTAAAAAT GTTCCTCAAT AAGTAGTATT 
    AGATATTAGC AGTCAACTTT TCACAAAAAA AAAAAAAAAA AATTTTTTTT 
    TCCCAAAAAA AAAAAAGTTT TTTTTAAAAA AAAAAAAACC CCCTTTTTTT 
    TGGCCAAAAA AAATTGGGAA TTTTCCCTTT TGGGTCCCCA AAAAGGGAAC 
    CAAATTTAAG GCTCCCAAAT TTAAAAAAGG AAAAAAAACC

AT1G13608.1

Model type
Protein coding
Short Description
Defensin-like (DEFL) family protein
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Computational Description
Defensin-like (DEFL) family protein; BEST Arabidopsis thaliana protein match is: Defensin-like (DEFL) family protein (TAIR:AT1G13609.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G13609.1

Model type
Protein coding
Short Description
Defensin-like (DEFL) family protein
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Computational Description
Defensin-like (DEFL) family protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Defensin-like (DEFL) family protein (TAIR:AT1G13607.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G13609.2

Model type
Protein coding
Short Description
Defensin-like (DEFL) family protein
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Computational Description
Defensin-like (DEFL) family protein; LOCATED IN: endomembrane system.
Link
InterPro Scan - TAIR