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Mutant Lines
GT15604

GT15604

CSHL Arabidopsis genetrap mutant lines

Original: GT15604

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15604

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 5; Position: 20523034 [Map]; Strand: w
- AT5G50390.1 - [+] show detail - Pentatricopeptide repeat (PPR-like) superfamily protein
  Distance: -54; Region: promoter

GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAATT CCGATCAATA 
TGATCTGGAT CCTCTGTTTG CTCCTAATCT CTTATTGACC CCATTCTCTT 
CCAATCATGG AGATTCCACT CTCGCGTTAC CAGAGCATAA GATTAGACGA 
GATTCGAGAC TCTTCTTCCA ATCCCAAGGT TCTCACTTTC CCGCGAAAAT 
TCTCGTTACG AGGAAGAAGA TGGAAGAACC CATTTGGAAG ACTCAGTTGT 
TCTTCTGTAG TTCAAGGTCT GAAACCAAAA CCAAAGCTGA AACCAGAACC 
AATTAGAATC GAGGTTAAGG AATCGAAAGA TCAGATTTTG GATGATACCC 
AGATCAGTAA ATCTGGTGTA ACGATTTGTA GTCAGATAGA GAAGTTGGTT 
TTGTGTAATA GATTCAGAGA AGCTTTTGAA TTGTTTGAGA TTCTGGAGAT 
TCGCTGTAGT TTTAAGGTTG GTGTTAGTAC TTATGATGCT TTAGTGGAAG 
CTTGTATTCG TTTGAAATCG ATTCGGTGTG TTAAAAGGGT TTATGGGTTT 
ATGATGAGTA ATGGGTTTGA GCCGGAGCAG TATATGATGA ACAGAATCTT 
GTTGATGCAT GTCAAGTGTG GGATGATTAT TGATGCACGT AGGTTGTTTG 
ATGAAATCCC TG

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 167367 [Map]; Strand: c
  - AT2G01350.1 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -108; Region: promoter
  - AT2G01350.2 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -120; Region: promoter
  - AT2G01350.3 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -114; Region: promoter
  - AT2G01350.4 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -120; Region: promoter
  - AT2G01360.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein
    Distance: -630; Region: promoter
Flanking Genome Sequence: GT15604 - 5-prime edge
```
GAACTCCGTA CTTGTTACAT GTTTGAGTGT TATGTTTTAT GTTGAATTTA 
ACTAAAATGC ACACGTTAGT ATGGAATGGG CTTCACAAAT AAAAGCCCAA 
TAGTATGTTT TTTTGGTAGG GAGCCCAATA GTATGTTGGT TCACCCAAAT 
ATCATTTCTT TCTCTGAGAG CTGTTTATTA TATTCCCTCC AGGAAGACCA 
ACAAGAACCA GAGTTGAATC AGTTCTACAA TGATCTCTGT CTCTCGATTC 
TTGTCGCCTC AATTCTACGC AATTCCAAGG TTTTATCCGA AAAAACCCAA 
TCTTTT
```

AT2G01350.1

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5853 Blast hits to 5853 proteins in 1914 species: Archae - 184; Bacteria - 3582; Metazoa - 59; Fungi - 129; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01350.2

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01350.3

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5825 Blast hits to 5825 proteins in 1916 species: Archae - 184; Bacteria - 3588; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1813 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01350.4

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01360.1

Model type: Protein coding
Short Description: pentatricopeptide (PPR) repeat-containing protein
Computational Description: pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G01390.1); Has 425 Blast hits to 414 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G50390.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR-like) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR-like) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G02010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR