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GT15637

CSHL Arabidopsis genetrap mutant lines

Original: GT15637

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15637

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19559721 [Map]; Strand: w
      • AT2G47720.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 2582; Region: intergenic
      • AT2G47740.1 - [+] show detail - pre-tRNA
        Distance: 134; Region: intergenic
    Flanking Genome Sequence: GT15637 - 5-prime edge 
    CTACTTTATC CCTGGTGGTT ATGCCCTTAA GAAAACTGAG CACCAATGAG 
    CTGAGAGTTT GGGAGATCTC TTGCGATGAG GATCATGACT CATGACATTC 
    CTAAACTATT CTCGAATCCT CTGAGTTACT CGTACCAGTC CATAGATGAC 
    CATACCAAGT AGCCTCTCGT GTGAAAATAG TGATAACAAT TAAAAATGGG 
    AAAATGCGCC TCCAGGGAAT CGAACCCTGG TCAGTACCGC GGGAG

AT2G47720.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G62770.1); Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47740.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Gly (anticodon: CCC)
Link
InterPro Scan - TAIR