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GT15678

CSHL Arabidopsis genetrap mutant lines

Original: GT15678

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15678

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14616570 [Map]; Strand: c
      • AT2G34670.2 - [+] show detail - Protein of unknown function (DUF630 and DUF632)
        Distance: -775; Region: promoter
      • AT2G34670.1 - [+] show detail - Protein of unknown function (DUF630 and DUF632)
        Distance: -837; Region: promoter
    Flanking Genome Sequence: GT15678 - 3-prime edge
    TCATCCCTAA ATTTCCATCC ACCTAAAAAG AGACCAATTA ACAAAATAAA 
    CTAATCATAA GATTGAGTTC GTGTCAAAAG GTCTGTGATA TGAGAGATCA
    ATAAACGTAA TTTGAAATTG ACTAAACAAA GGTTAACGTC TATGAAAACA
    AATGATGTAT GCATTTTACA GTCATTATCT TTTAGTCTAG TCTTTAACAA
    GAACAAACCA AACCTAATAT GCAATTCAGT TGAAGTTGGG TTTGTAATAA
    TAGCACTTCA AAAACCTGAT TGAAATTTGA TTTTAAAACC CATTTGGTAT
    ACAGCGCAGC ATATTGGAAA GATGAAAGCA CCAAAACAAA CAGAGAGACA
    ATTCCATCAA CAAAGCGAAT GAGATTTTGA ATGGCACACT GAAATAAAGT
    TGCAATGGAC GTGTTCGCTC T
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 616571 [Map]; Strand: w
      • AT2G02340.1 - [+] show detail - phloem protein 2-B8
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT15678 - 5-prime edge
    CATACTTCAT GTATTTCCGC TACTGTTTCA AACCTGAATA AGGAATGGCA 
    ACATTTTTCA CCAATAAAAT CATCTAGCCG AGTCATTAAA ACCAAATTAA
    TTA

AT2G02340.1

Model type
Protein coding
Short Description
phloem protein 2-B8
Computational Description
phloem protein 2-B8 (PP2-B8); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B7 (TAIR:AT2G02320.1); Has 560 Blast hits to 546 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 560; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G34670.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF630 and DUF632)
Computational Description
Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) (TAIR:AT3G51290.2); Has 1510 Blast hits to 1233 proteins in 150 species: Archae - 0; Bacteria - 53; Metazoa - 434; Fungi - 99; Plants - 668; Viruses - 99; Other Eukaryotes - 157 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G34670.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF630 and DUF632)
Computational Description
Protein of unknown function (DUF630 and DUF632); EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) (TAIR:AT3G51290.2).
Link
InterPro Scan - TAIR