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GT15751

CSHL Arabidopsis genetrap mutant lines

Original: GT15751

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15751

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 387028 [Map]; Strand: c
      • AT2G01850.1 - [+] show detail - endoxyloglucan transferase A3
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT15751 - 3-prime edge
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCGCTGAGG 
    CTCAAAGGCT TAGGGTTTAT GATCCGGTCA GATTTGGCGG CATTCCAAGG
    CGCCACCGCA ATGGAAAGCA CCGGAGCAAG AGAAGCCGGG TTGATGGAAC
    CGAGTCGATA TGATAACATA TATAGGCAAA ATAGTATGGG TGAGATTTGG
    GGGTTCTATA ATAAGTCCAT TATTTTGGTT ATTTATGATT CAATGCATTT
    TCACATATAG AGGAGGCATT TTTGTCATTT GTTAGTTGTA TATCATTATA
    AGAAAAGAAA AAATAATTAA TTTATTTATT TGTGATATTT TTTTTTATAT
    ATGATAAATT GTTTCTTGTT TTTGTGAATA CTTTACAGTT GTTTACGAAT
    ATTATCGGTG TAAATAATTT CAGATATCTT GGAATTTATA TTTGTATTCA
    ATTTTGGGTA CTTTATGTGA CGAGAGTTTT GTCTCGCTTG TACTTGTTTT
    ATTCAATGGG TCCGACGAAT ATTGTTTTAA TTTTGTGTGG TCATGTTCAT
    GCACATATGT AGTATTATTA TTACATACAA CAAAATTTTT ATGTGATCAC
    ACATGGTACC TTTCGCATTC GAACAAAATT TGAGCTTGAG TAAACAATTC
    ATTTTTGTCA ACAAAAATAA TGTTTGTTTC GTTATTAACA AACGATTTAA
    CTATAAGGAA AATATCAAAA GAAAAGTATG GAGCAAAAAA ATTGTTTTTT
    ATATACATAT AAGTCGGATT TGGCAAAATT TTAGGGACCA TCTAAAAGAT
    AGAATTGTGA AAAACTAGAC AAAATTGGCT TAGCTCATTA
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 386553 [Map]; Strand: c
      • AT2G01850.1 - [+] show detail - endoxyloglucan transferase A3
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT15751 - 5-prime edge
    AACCAAAAAG AACAACAATT TCACAACTTT GATCAGTAGT TTAGTACAAA 
    CTACATAATT ATAACCAAAA AAAACATTTA TTTGGATTAA GTAAGTTAGA
    TTCTTGTAAG CTTAGAAAGA TAACATTATT GGCATAAAAA TTTGAGCTTT
    TGTGAACTTA AGTAAAGATT CTCAACTTGT GAATTGGACC CCAAACATAC
    TCTCTATGGG GTCATTGTTG ATGCCAAAAA ACGAAAGCTG TAAACCATTT
    TAGGCGATCA CACACACACT TAAAATTGAC AGGAACATTA CAACCAAAAG
    CA

AT2G01850.1

Model type
Protein coding
Short Description
endoxyloglucan transferase A3
Curator Summary
EXGT-A3 has homology to xyloglucan endotransglucosylases/hydrolases (XTHs). Mutants in this gene show a lesion mimic phenotype associated with leaf maturation and a reduction in the number of tertiary veins. Individual tracheary elements in the mutants are shorter, but phloem transport activity is not severely affected. EXGT-A3 plays a role in xyloglucan degradation in the differentiating tracheary elements of rosette leaves.
Computational Description
endoxyloglucan transferase A3 (EXGT-A3); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: phloem or xylem histogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 28 (TAIR:AT1G14720.1); Has 2101 Blast hits to 2091 proteins in 291 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 449; Plants - 1341; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
Link
InterPro Scan - TAIR