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GT15774

CSHL Arabidopsis genetrap mutant lines

Original: GT15774

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15774

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19260031 [Map]; Strand: w
      • AT1G51860.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT15774 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGCTGGC AAGGAGATCC 
    GTGTGCTCCT CAGCTTTATC GGTGGGAAGG TTTAAATTGT AGTTATCCGG 
    ACTCCGAGGG ATCAAGAATC ATATCCTTGT ATGTTACGTA TTCTTTATCA 
    CAAGGTTCTC TAGTTTTGGT TCTTTCACAA AATTCTAACA ATTATGGATA 
    CTTTTCTTGT TTCACAAACT TTAGGAACTT GAATGGGAGC GAGTTGACAG 
    GTTCTATAAC ATCTGACATA TCCAAGCTAA CACTGTTGAC AGTATTGTAA 
    GCATCCGAAC TGCAACACCG ATAAACTTAG TACGCTTTAT TTCTATGGGA 
    TTCTGTAATA TAATAGTTCT GCTAAAACTT TGGTTCCTCT GTTTAATGAA 
    CAGAGATTTA TCAAATAATG ATTTATCAGG AGATATTCCA ACATTTTTTG 
    CTGAGATGAA GTCGTTGAAA CTCATGTGAG TTTCTTTTCA CATACTCTCT 
    CAGTCTTTCA CTGCACTTAT TGTTTTGCT

AT1G51860.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: root hair specific 6 (TAIR:AT1G51880.1); Has 130458 Blast hits to 118907 proteins in 4509 species: Archae - 103; Bacteria - 13378; Metazoa - 43517; Fungi - 9721; Plants - 46311; Viruses - 360; Other Eukaryotes - 17068 (source: NCBI BLink).
Link
InterPro Scan - TAIR