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GT15816

CSHL Arabidopsis genetrap mutant lines

Original: GT15816

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15816

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3110480 [Map]; Strand: c
      • AT3G10090.1 - [+] show detail - Nucleic acid-binding, OB-fold-like protein
        Distance: -454; Region: promoter
    Flanking Genome Sequence: GT15816 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTATAT 
    TGGTAGCAAG TATAAAAGAG ATAGGAAATC TCGGTTGAAA TATTCAAGAA 
    ATTGTGTTTT TAGTTATTAT AGAGAGATTT ATCAAAATGT TTTTGAGTTG 
    TTAATATTAT TGACAATAAA TTTGTTTATT TCTAAAACCG AATCGTAAGA 
    TTTTTCGAGT ATTAAATATT CGTAGAGAGA TTAAATCTCT ACATATTTTC 
    AAATCTCTCT TTTTCTCTTC

AT3G10090.1

Model type
Protein coding
Short Description
Nucleic acid-binding, OB-fold-like protein
Computational Description
Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S28e (InterPro:IPR000289); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT5G03850.1); Has 1066 Blast hits to 1066 proteins in 391 species: Archae - 235; Bacteria - 0; Metazoa - 333; Fungi - 148; Plants - 161; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink).
Link
InterPro Scan - TAIR