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GT15817

CSHL Arabidopsis genetrap mutant lines

Original: GT15817

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15817

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 529558 [Map]; Strand: c
      • AT3G02530.1 - [+] show detail - TCP-1/cpn60 chaperonin family protein
        Distance: 0; Region: intron11 (CDS)
    Flanking Genome Sequence: GT15817 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAGGTAC 
    TTACTAATAC GACACACTCA TCTTCTAGGG TATTCTTAAC TGATCTTAAA 
    CCATCACGGA CAGCGTCCTT AATTTGAGCA ATAGTGTGGT CATTAGGCCC 
    TATAAAGAAA ACCAAATCAT AATCATAGAT AATCAATGAC CACACATATG 
    AAGATAAGCA AAATTGATCT TCAAAACTTA GCTGGCAAGA GATAGAAGTT 
    TGGGCATTTG TACCTTTTAT GAGGATAGTA CATGAATGAG GATTCTTCAC 
    TTGCTCAACA AATGTGTACT TCTCCTCTCC AAGAACGTGC TCATATACAA 
    GTCCAGCCCA ACCAAGACAA TCAGGGGTCA AGTCATCGAC AGAGTTCACA 
    GCTTTCTCCA CCACATGCCA AAACCAAACG TTCCATGTTC CTCCTCTTTG 
    CCCTTCTAAG GGCGATTATC TGGAGATACA TATATACATA TATAAGGAAA 
    CAGAAAGATA ATTCTCTTGT AACAACTTGT AGACACAAGA AACAGAGCAC 
    AAGACAAAAA AAAACAAGCT TGGTGGAAGA TCCAGGCATT TAAGAGATTC 
    TAGGTGAATA CTCTTAGTGG ATAACCTTTT CTCTATT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 529480 [Map]; Strand: c
      • AT3G02530.1 - [+] show detail - TCP-1/cpn60 chaperonin family protein
        Distance: 0; Region: intron11 (CDS)
    Flanking Genome Sequence: GT15817 - 5-prime edge 
    ACCTTCTTCT CCTCGACAAA AATCCATTGC TATATCAGTG TGATTGTTTT 
    GGTTTTGGGC GCATGTGGTT TATTGACATC TGTTTCTTTC TGTAGGGAGC 
    TGGAGCTTTT GAAGTTGCAG CAAGACAACA CTTAATCAAT GAAGTCAAGA 
    AAACCGTTCA AGGGGTGAGT AGAAAGCAAT ATTCCTTTGC TCCAATACCA 
    ATTCTTGTTT TTTTCCGGTT GCTAATGTAA ATTGTGGGCA AATTGCAGCG 
    CGCTCAACTC GGTGTTGAAG CTTTTGCTAA TGCCCTTCTC GTAGTGCCTA 
    AGACGCTTGC TGAAAATGCT GGGCTTGACA CTCAAGACGT TATCATTTCT 
    CTAACGGTAT TATTCTTGTA TTTTCCTCTT CTGCCACTAT CGATTATGCT 
    CCAAGTAAAA TTATGTTTGT GTTTATCTAC TGAGTTTCGA TGTATATACA 
    GAGTGAGCAT GACAAAGGAA ACATCGTGGG ACTAGACCTA CAGGATGGAG 
    AACCCGTCGA CCCTCAGCTT GCCGGCATTT TCGACAATTA CTCGGTGAAA 
    CGCCAACTTA TCAATTCAGG GTATGTGCAG AACCAAATGG AAATTTGTAT 
    AATGGAGTCT TTTAATTCAG TTGCGGTTGA GTTCAGGTTG TTAAAACGGT 
    TGTTTGGTAT TGTATTGCAG GCCGGTGATT GCTTCGCAGT TGCTATTAGT 
    GGATGAAGTG ATTCGTGCAG GAAGAAATAT GAGGAAGCCT ACTTAAACAA 
    GACTATCTTT TGTTTTCAAT TTTTTCTTAC TTTCCCTTTC

AT3G02530.1

Model type
Protein coding
Short Description
TCP-1/cpn60 chaperonin family protein
Computational Description
TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: response to cadmium ion, response to zinc ion; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, zeta subunit (InterPro:IPR012722), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G16070.1); Has 18475 Blast hits to 17833 proteins in 3650 species: Archae - 805; Bacteria - 8777; Metazoa - 2106; Fungi - 1471; Plants - 861; Viruses - 0; Other Eukaryotes - 4455 (source: NCBI BLink).
Link
InterPro Scan - TAIR