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GT15842

CSHL Arabidopsis genetrap mutant lines

Original: GT15842

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15842

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16503404 [Map]; Strand: w
      • AT3G45095.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT15842 - 3-prime edge 
    AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAATTA 
    TCATCCACTG CTCTCACCGT CTCTGCAACC CCATCAACAA CCTCGCCTAT 
    ACAGCCGCAT AAATTCAACA ACTACAGAGG AAACAAAAAG AAGAACAATC 
    ATTTCAGAGG AAACAAGAAC AACAATCAGT TTCACCCCAA TCAACAAAAT 
    TGGACTTACT CAAATTTCTG GCCCAGACCA TTTAATCTGT GGCCCAATCA 
    ATTTGCGAAC TGGGGACCCA ACTCTCAACT AGGCTCATAC CGAGGCCCAT 
    ATGTCTTTCC TCAAATACAC CAGTACCCTC AACAAGCCCA TCTGACGGAA 
    ATTCAGTCGA CGACTGACTT CACACAAGCT TACACGATAA AGACTTTGGT 
    TGATCCTAAT GGTGCACCAT GGGTCATGGA TTCGGCTGCC ACTGCACATC 
    TCTCGGGCAC AGCAGGTAAT CTTCACTCTA ATCTTAATCA TAACATCACT 
    CACTCGGTCA TCGTTGGTAA TGGTTCAAAA ATTCCTTCAA TTTACGGCTT 
    ATGTCAAAAA TCAATTCAAT ACCCAAATAA AATCTTGTCA ATGCGACAAT 
    GGAGGAAAAT ATAATAACCA TGAGTTCAAG AATTATTTGG ATTCAAATGA 
    AATTACAGTT CGTTTTTCTT GTCCTCACAC ATCTCAACAA AATGGAAAGT 
    CTGAGCGAAT GATACGCACC ATT

AT3G45095.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 2.4e-140 P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element)
Link
InterPro Scan - TAIR