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GT15872

CSHL Arabidopsis genetrap mutant lines

Original: GT15872

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15872

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2557382 [Map]; Strand: c
      • AT5G07980.1 - [+] show detail - dentin sialophosphoprotein-related
        Distance: -1863; Region: intergenic
      • AT5G07990.1 - [+] show detail - Cytochrome P450 superfamily protein
        Distance: -3012; Region: intergenic
    Flanking Genome Sequence: GT15872 - 5-prime edge 
    CCTACTTTCT CCCTGGATGA CAGTATACTA GGAGATGGAA ATATCTTCAT 
    GGACTAATAA ATGTATCATG TGACATGTCA ATATATTAAT TCCTATTACA 
    AATTAAAAGT ATCTCTAAAA ATTAAAATAA TTTGCATGTG GGAAGATGTG 
    GAATCAAACT AATACGTCAG AGAAAAACAA GAAGAATGAC TTGCCATATT 
    TGTCGAGGTA CCGTAAGTAA ATGGGTTAAA CCAGAACAAG AAGGTAAAGT 
    TTGGTTTCCT TTTTCGGTTC GGTTTCAGGT TTTAGGCAAA TCACATAAAT 
    TTTAGTTTTA TAGAAACTCA AACCTCTGGA TTTACTGCTA TAGACAACGA 
    CTATCAATAT TGAACAACAC GGAAACAACG TCATTCAATG ATTCAAGAAT 
    TCGTAATTCT CAAAACTCTG CAG

AT5G07980.1

Model type
Protein coding
Short Description
dentin sialophosphoprotein-related
Computational Description
dentin sialophosphoprotein-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07940.2); Has 1336 Blast hits to 783 proteins in 174 species: Archae - 4; Bacteria - 291; Metazoa - 248; Fungi - 128; Plants - 141; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G07990.1

Model type
Protein coding
Short Description
Cytochrome P450 superfamily protein
Curator Summary
Required for flavonoid 3' hydroxylase activity.
Computational Description
TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink).
Link
InterPro Scan - TAIR