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GT15905

CSHL Arabidopsis genetrap mutant lines

Original: GT15905

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15905

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17558526 [Map]; Strand: c
      • AT1G47710.1 - [+] show detail - Serine protease inhibitor (SERPIN) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15905 - 3-prime edge 
    ACGGTAGAGG TTTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACGGTA 
    GTGCTAACGG TGGTCCTAAG CTCTCGGTGG CTAATGGCGC CTGGATCGAT 
    AAGTCTCTCT CCTTTAAACC TTCCTTTAAA CAGCTCTTGG AAGATTCGTA 
    TAAAGCTGCT TCGAATCAAG CTGATTTTCA ATCGAAGGTG AGTTTTCTGA 
    TTTGATTACT TGGTTCTGTG ATCTAGACTT AGTTCTTCAG GTACAGAGGA 
    ACTTTGTGTG GATTGTAATA GAATCACTCT TAGGCCAAAA TGTGGAATTT 
    TTGTTTCTGA ATTTTACACT TGAGGATCTG TATATGATCG TATTAGGGTG 
    GCTTGTGATT TGATTCTACA GAAATCTTGC TCTCGAATTC GTTTTATTGA 
    TTGCAATATG ATTACTACAT TTTGATTCTG CTTCCTAGGG TGTTGTAAAT 
    ACTAACTTTG TGTGGATTTT AGTAGACACA ATCAAAGGCC AAAATGTGGA 
    TTTGTTGTTT TCATTATGTT ACCCGACCGG ATCGTATC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17558470 [Map]; Strand: c
      • AT1G47710.1 - [+] show detail - Serine protease inhibitor (SERPIN) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15905 - 5-prime edge 
    CCTACTTTCT CCCTGCACTA CCGTCAGCGA GAACAGCGGA GACGATTTCG 
    GAAGAGAATG AATTAAGTTG ATCAGTGGAA GAGAATTTGA GAAACGAGAG 
    GATCTGATCT TTGGTAGCGC CGGCGGATCC AGCGGCGATT ATACTGAGTA 
    CGACGTTGAT TGAAGCCGGT GAGAAGATGA CGTTGGAGTT TTGAGAGACG 
    GTGGTGATTA CGTGTTTTGC GAGATTCATG GAGACTTGGT TTTGCAGTGA 
    GATTGATTCA CGCACGTCCA TTTTCGCCGG AGGTTGTGGT GGTGATGACT 
    GGTAAACGAA TTTGCTGGGT TTAGGAGAAG ACGATTGATA TATTTATTTT 
    AGAGAAATAT CTTAAAATTA TATAATAATA ATTAAATACA AAGATTATAA 
    ATGACATGTC GGTCAAATTT TTTTATTTTT TTTCTTCTAG CACGTCGGTC 
    AATGGTATTT GACTATCTGG TGGCATATGA AAAAATTATA ATTTTTTTAT 
    TTCTTTTGTA TAAATAAATT AGAAAATTAT AATTTTTTTT AATTATAAAA 
    TAAAATAAGG GTAAATAAGA CTTAATTTTT TTTTTGAAAA CCCTACTTTT 
    GACTAATCTA CAAAAAAAAT AAATAGAGGG ACAATTTTGT TTAATAAAAT 
    CCTTAAAATT AAGTTTCCCC AAAAATTTTT TGTTTTAAA

AT1G47710.1

Model type
Protein coding
Short Description
Serine protease inhibitor (SERPIN) family protein
Computational Description
Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity, cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT3G45220.1); Has 6643 Blast hits to 6565 proteins in 500 species: Archae - 66; Bacteria - 387; Metazoa - 5142; Fungi - 12; Plants - 353; Viruses - 463; Other Eukaryotes - 220 (source: NCBI BLink).
Link
InterPro Scan - TAIR