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Mutant Lines
GT15908

GT15908

CSHL Arabidopsis genetrap mutant lines

Original: GT15908

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15908

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 144713 [Map]; Strand: c
- AT2G01275.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: -189; Region: promoter
- AT2G01275.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: -425; Region: promoter
- AT2G01280.1 - [+] show detail - Cyclin/Brf1-like TBP-binding protein
  Distance: -963; Region: promoter

GAAACGGTAG AGGTTTTTAC CGACCGTTAC CGACCGTTTT CATCCCTATA 
TGCATACATA TACACGTGGT TATTTCATCA CTAATTAATA TATGGCCAAC 
AGAAAATGCC TTGGAAAAAC AAATAGATGA AACTGACAAC AATCAATAGT 
AGTATGTTAT GGATGAAAGA AAGAAAAGAG AGTAACCCAC AACGATGTAA 
CTTTTTCAGT GTAATAAAAA AGCAGTTTGA CGACAAAAAA AAAGGGTAAA 
AAATGGTGGG ATTATGGCAG GAGAACCCGG GTAAGGGTGG CAATGGGAAA 
GCGAATCACG GGGAAAGGGG GGGGGACATC TTTGGAACGG TGGAAACCTA 
CCCCCTACCT AGAAAAAAAA AAAAAAAAAA TCCCCCCCCC CCCAACGGGG 
TCCCTTTTTT TTTTTTTTGG AAAACAAAAA AATGGGGGGG GGGGTTAAAA 
ATCCGGGGGT TTTTTGGGCC AAAAAAAAAG GGGGGGGGAA AAATTTTAAA 
AAGGGGCCGG TTTGGGGTTA AAATTTTCCG GGGAGGGAAA TGGCCAATTT 
TAGGGGGGTT TTTTTCGGGA AAAAAAAATT TTAAAAAAGT AAAGGGGGGG 
GGGCCCCTTC CAAAAAAAAA AATAAAATTT CCCCCCCAAA AAAAAAA

AT2G01275.1

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G38070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01275.2

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G38070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01280.1

Model type: Protein coding
Short Description: Cyclin/Brf1-like TBP-binding protein
Computational Description: maternal effect embryo arrest 65 (MEE65); FUNCTIONS IN: RNA polymerase II transcription factor activity, cation:chloride symporter activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670), Brf1-like TBP-binding (InterPro:IPR011665); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT3G09360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR