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Mutant Lines
GT15909

GT15909

CSHL Arabidopsis genetrap mutant lines

Original: GT15909

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15909

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 17558621 [Map]; Strand: c
- AT1G47710.1 - [+] show detail - Serine protease inhibitor (SERPIN) family protein
  Distance: 0; Region: exon1 (CDS)

TCGATAAGTC TCTCTCCTTT AAACCTTCCT TTAAACAGCT CTTGGAAGAT 
TCGTATAAAG CTGCTTCGAA TCAAGCTGAT TTTCAATCGA AGGTGAGTTT 
TCTGATCTGA TTACTTGGTT CTGGGATCTA GACTTACTTC TTCAGGTACA 
GAGGAACTTT GTGTGGATTG TAATAGAATC ACTCTTAGGC CAAAATGTGG 
AATTTTTGTT TCTGAATTTT ACACTTGAGG ATCTGTATAT GA

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 17566127 [Map]; Strand: c
  - AT2G42120.1 - [+] show detail - DNA polymerase delta small subunit
    Distance: -95; Region: promoter
  - AT2G42120.2 - [+] show detail - DNA polymerase delta small subunit
    Distance: -95; Region: promoter
  - AT2G42130.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: -58; Region: promoter
  - AT2G42130.2 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: -58; Region: promoter
  - AT2G42130.4 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: -58; Region: promoter
  - AT2G42130.5 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: -96; Region: promoter
  - AT2G42130.3 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: -127; Region: promoter
Flanking Genome Sequence: GT15909 - 5-prime edge
```
CTTTCTCCCT GGCTTTGAGA ACAGACCTCA GGAAAAAAGA GTTAAGGTGG 
GAGTGTCTGG TTCAACCGTT TTATATCCGG TTCAAATTAA ACCTCTTACA 
ATTAACCGGG TTTTGTGTTT GGTTCGATTG TTCATAAAAG AAAGAAGACT 
CTTGTCGTCG ATTAGTGCCA AAGTTGAAAG TTGAAACCTT TTCTCAGAAT 
TTTCTGCTCA GTTCTGAGTT TTTTTTTCCC GCCATGGAAA TCGACTCCGA 
GAAAATTCAC GAAAGGAAGC AATCCGATTA CAATTCGCTG GTACGAACTC 
TATTACTTTA TCGACTTGTA GTGAAAGACA AATGTAATCA TTCGTGGTGG 
TGACTGTTTC TACTTATAAG TGTACGGCGC TAGGGTTTGT TATCTGATTC 
TGAGTTTTTG CAATTGAAGC AGGATGAGAG ATTCGAGATA CAGAAGGAGA 
TGTACAGAGG TCAGCAATAC AGTCAGATTT ACTTTGCTC
```

AT1G47710.1

Model type: Protein coding
Short Description: Serine protease inhibitor (SERPIN) family protein
Computational Description: Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity, cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT3G45220.1); Has 6643 Blast hits to 6565 proteins in 500 species: Archae - 66; Bacteria - 387; Metazoa - 5142; Fungi - 12; Plants - 353; Viruses - 463; Other Eukaryotes - 220 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G42120.1

Model type: Protein coding
Short Description: DNA polymerase delta small subunit
Computational Description: DNA polymerase delta small subunit (POLD2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G42120.2

Model type: Protein coding
Short Description: DNA polymerase delta small subunit
Computational Description: DNA polymerase delta small subunit (POLD2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G42130.1

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastoglobulin 34kD (TAIR:AT3G58010.1); Has 81 Blast hits to 81 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G42130.2

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastoglobulin 34kD (TAIR:AT3G58010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G42130.3

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastoglobulin 34kD (TAIR:AT3G58010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G42130.4

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastoglobulin 34kD (TAIR:AT3G58010.1); Has 147 Blast hits to 147 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G42130.5

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastoglobulin 34kD (TAIR:AT3G58010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR