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GT15963

CSHL Arabidopsis genetrap mutant lines

Original: GT15963

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15963

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2309252 [Map]; Strand: c
      • AT2G05970.1 - [+] show detail - F-box family protein with a domain of unknown function (DUF295)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15963 - 5-prime edge 
    CTTTCTCCCT GTGTGGAAGA TAAAAAACTC TTTAGTCTAC GCCAAGAAAG 
    GGAATCACAC GTGGCAACAA GTTTTCTCTA TGAACGAAGA ACTATCCGTA 
    GAACAAATTG TTTACGAACA CAAGACTCAA AAACTTTACG TACATTTTAA 
    TGATTCTACT TTAAGTATTT GGCGTTTGTC TAGAGAGGAT CCACATGGTG 
    TTTTTGAAAA TTATATTCCA TTTGACTTTG TTTTTCAAGA CTTCCTTCCG 
    GATAGAAGAA GTGACGAAGA GTTATATGTG AAAGAGTATA TTGACACGAG 
    GCTAAACATT GCACTAACAA CATCTGGAGA ACTCTTGAAG GTAGCTAGTG 
    TAGTGCAAAA GTCCAAAAGA TGGCTCTTTC GCATCTACAA GATGAACTAT 
    ATCAAGCGTC GTTGGGAAAG AATCGAGTCT TTGGGCGATG AGGCATTGAT 
    CTTAGATATG GGTATTACTA TTGTTGCCAA AGACATCCCC GGGCTCAAGA 
    GAAACTCAAT TTATATTAGT GGGTTTGATT ATGGTAGAAA ACATCTAGAC 
    CATATATTTA TCTTTGATCT TACAACCCAA GAGAGTGAAC CTTTGCCATA 
    TTGTGTTTCC TCCTCCAATG ATTTCTCTGA TGCTCGATGG TTCTTCCCAA 
    GTTTCAGTCA ATCTCCTTAT TAGATTTATT AGATGACTAT GTGCATCAGA 
    ATAGGGTGGT GGGACATCTT TGTATAGCCG TAA

AT2G05970.1

Model type
Protein coding
Short Description
F-box family protein with a domain of unknown function (DUF295)
Computational Description
CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT4G17565.1); Has 491 Blast hits to 474 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 491; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR