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GT15965

CSHL Arabidopsis genetrap mutant lines

Original: GT15965

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15965

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT15965 - 3-prime edge 
    AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAC CCGCTAGTCC 
    CATTTGTTGT CTCAACCATT TCAATTGCAG CTTTTTGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 533960 [Map]; Strand: w
      • AT1G02530.1 - [+] show detail - P-glycoprotein 12
        Distance: 0; Region: exon9 (CDS)
    Flanking Genome Sequence: GT15965 - 3-prime edge 
    AAACGGTAGA GGTTTTTACC GACCGTTACC GACCGTTTTC ATCCCTACCC 
    GCTAGTCCCA TTTGCTGTCT CAACCATTTC AATTGCAGCT TCTTGAGCTC 
    ATGCTCCGTC TAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 534177 [Map]; Strand: w
      • AT1G02530.1 - [+] show detail - P-glycoprotein 12
        Distance: 0; Region: intron9 (CDS)
    Flanking Genome Sequence: GT15965 - 5-prime edge 
    AGGTAATGGA ATAAAAACAG AACAAATTTG TAAGAACTCT GTTTTTCAAA 
    GTTTCTTACG ATGCAAGCAA TACAATTTTG TAGGGTTACG ACACAGTGGT 
    GGGAGAGAAA GGGATTCAGT TATCAGGAGG ACAGAAACAG CGGGTAGCTA 
    TAGCACGTGC CATCGTGAAA GAGCCGAAGA TATTGCTTTT GGACGAAGCA 
    ACGAGTGCTC TTGATGCAGA ATCAGAGCGA CTGGTTCAGG ATGCGCTTGA 
    CCGAGTGATT GTAAACCGAA CCACGGTTGT GGTGGCTCAC CGGTTATCGA 
    CCATTAAAAA CGCTGACGTC ATTGCCATCG TTAAGAACGG TGTGATCGCT 
    GAGAATGGGA CTCACGAAAC GTTGATCAAA ATAGACGGTG GGGTTTATGC 
    TTCCCTT

AT1G02530.1

Model type
Protein coding
Short Description
P-glycoprotein 12
Computational Description
P-glycoprotein 12 (PGP12); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 11 (TAIR:AT1G02520.1); Has 834511 Blast hits to 387558 proteins in 4042 species: Archae - 14726; Bacteria - 649276; Metazoa - 18491; Fungi - 13092; Plants - 9791; Viruses - 35; Other Eukaryotes - 129100 (source: NCBI BLink).
Link
InterPro Scan - TAIR