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GT15977

CSHL Arabidopsis genetrap mutant lines

Original: GT15977

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15977

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1976041 [Map]; Strand: w
      • AT4G04120.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT15977 - 5-prime edge 
    TCATCGTCTC CCAATGTGCT CTATGTAACG TCTAATGGAA ATCAAAACTC 
    CGTGTCTCGC GACAACAATC ACAACACTTA TCGCGACAAC AACAACACCG 
    GCTACCGCGA CAACAACCAC AACAACTACA ATGGGCACAA CAACCATGGT 
    AGAGGTCGTG GACCTGGACC TTGCGGTACC GGCCGCAACG G

AT4G04120.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 3.8e-19 P-value blast match to GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996361|dbj|BAA78423.1| polyprotein (Arabidopsis thaliana) (Ty1_Copia-element)
Link
InterPro Scan - TAIR