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GT15986

CSHL Arabidopsis genetrap mutant lines

Original: GT15986

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15986

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 359308 [Map]; Strand: c
      • AT4G00850.1 - [+] show detail - GRF1-interacting factor 3
        Distance: 114; Region: intergenic
      • AT4G00860.1 - [+] show detail - Protein of unknown function (DUF1138)
        Distance: 7; Region: intergenic
    Flanking Genome Sequence: GT15986 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACAA 
    ACCAATAATG TCTTAGAAGT TTTTCATCTC AGCGTCGCAC ATATCATTTA 
    TCGTCAAAAT CAACAAACCT TACAAAAGTT ATGCATCGGG GAAAAGCTTG 
    ATCCGAATAA TGTGTTACGC ATCAACACAA ATTATTACTA TAACCAGCTA 
    GAGCAATCAG CCGATCCTCA TATCAAACAC AAAAGAGCAG ATATTCGAAA 
    ATGAATCCAT AACGAATGAG AACGATGCAC GAGAAGGCAT CAAAAGTTAT 
    TCAGGACGTG ACTTGACGAT GAAATTCTGG CGACTGATAG GGTTCATGAC 
    GACGGGAGGA CCAGCAACTC TTGGCCATGC TTGTAATCTC TCTTCAGTCG 
    CAGCACCCCA TTCCTTGTTA GTAATAGTTC CTGGTGTAGT ACCTGAGAGT 
    TCAAAACAAA CCAAACCAAA TTTAGCTTTC TGGATACATC ATAAGTAGCT 
    TTATAAGGTT TAAAACTTGC CTCCAAAAAG CTTATCATCA GAAATAACTT 
    TGTCACACAC GTAAGCTACT ACCGCAGATC CCGCAAGGGC ACCGATAATG 
    TATGTAGCTC TTGACATCCT TAACCTGAAG TACATAGATA TATCAAACAT 
    AATCAAGCCA CACAAAAGGA GAAAACGAAC TTATATCAGA TTATAGCTAT 
    AGTGTATAGT GGGATTGAAA TGAAGTTTCA AGGCATATTC AACCCTAATC 
    AAGCCAATAC AATCACATAA AACCATTAGA TAATTAAGCT GCTGAATCAA 
    ACAATTCAAT TCAATTATAG AAGACACAAA TCAATAAAAG CATCTGAATG 
    GTGAATTTT

AT4G00850.1

Model type
Protein coding
Short Description
GRF1-interacting factor 3
Curator Summary
Arabidopsis thaliana GRF1-interacting factor 3 (GIF3) mRNA
Computational Description
GRF1-interacting factor 3 (GIF3); CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 2 (TAIR:AT1G01160.1); Has 414 Blast hits to 414 proteins in 93 species: Archae - 0; Bacteria - 2; Metazoa - 279; Fungi - 27; Plants - 81; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00860.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1138)
Curator Summary
putative pathogenesis-related protein whose transcript level is induced in response to ozone and pathogenic Pseudomonas strains.
Computational Description
ATOZI1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to reactive oxygen species, response to bacterium, response to ozone; LOCATED IN: mitochondrion, peroxisome, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT1G01170.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR