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GT15991

CSHL Arabidopsis genetrap mutant lines

Original: GT15991

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15991

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1948899 [Map]; Strand: c
      • AT3G06410.1 - [+] show detail - Zinc finger C-x8-C-x5-C-x3-H type family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT15991 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAAACTGCA TTGCTTAAAA 
    CCGGAACATA GTTTGATCAG AAAGAGATTC AGATAACAAA ACCTGACAAA 
    CCGGATGTCC CATCCTCTCC GGTAAAGCTC CAGCTTCACC TCTCACAACT 
    ACAATAACCT AAACATCAAA ATCAGAGCTT ACAAAAAACT TCTTCTTAAG 
    CATTTTGGTT TGTTTATATG TGCTTTAATT TAACAATGCC CAGTGACCAA 
    TTTAAAGATC TGATCATCAG ACTCTCAGTA GCTGATCTGA AATTGAAATT 
    GGTGAATAAG GAGAAGAATC TGAAACTGAG AAATCATTTA CCGCTCCACG 
    ATCTCGTGGG TGATTAAACC GACATCTTGA GCCGTACCCG CAAACGCCGG 
    TTCTCAAGTA ATAAATACAA TCAGGCTCGT CAGGTCTCTC CGGGTACGAT 
    TCTCCACCTC CTCCACCTCC GCCGCCGCCG CTCAACCCTA ACCGCCACAT 
    CGGAGCTACA AAAACACGCA TTTGAATCAG AATTCACAGC TCTAATCGCA 
    GATTAATCCC GAAAAATCAA AACTTTAACA AGAGACATTA CCTTCAACAG 
    CGGTTTCACC ACCATGAGAG GTCCATTCAA GAGATGGATC CGATCGCGAC 
    CCTTCTTCAC CGGGGCGACC GTACCGCTCC ATTGATAGAC CCTAATCTCT 
    ACAGAGGGAG ACAAATCCCT CAAAAGAGCA AA

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT15991 - 5-prime edge 
    TTTTTTGGGC CCCGGGGAGG GAAAAAAGGG GGGTTTTTTG AAAATTTCCC 
    CCCCCAAAAA AAGGGGGGGG GGGGTCCCCC CCCCCCCCTT TTTTTAAAAA 
    AATTTTGGGG AACCCCTTTC CCCCCGGGGG GGCTCCAAAC CCCCCAAGGG 
    GGGGGGGGGG GCCCCCCCCC TTGTTTTGGG GGCCCCCAAA AACCCCCCCA 
    AATTTTTTTT TCCGGGGAAA AAAAAGGGTT TTTTTTTTTT TGAAAACCGG 
    GCGGGGAAAA TTTGGTTTGC TTTGAAAAAA AAACCCCCCC GGCCCCCCCC 
    GGTAAGGGGG CCCCCCCCAG GCCCCCAAAA AAGGGGGCCC CCCCCCCCCC 
    CCGGGGTTAA AAATTTTTTT TCCAAACCTT AAACCCCAAT TTTTTCCCCC 
    CCCCCAAAAA AAGGGGTTTT TTTT

AT3G06410.1

Model type
Protein coding
Short Description
Zinc finger C-x8-C-x5-C-x3-H type family protein
Computational Description
Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 3128 Blast hits to 1576 proteins in 227 species: Archae - 0; Bacteria - 85; Metazoa - 789; Fungi - 248; Plants - 1012; Viruses - 7; Other Eukaryotes - 987 (source: NCBI BLink).
Link
InterPro Scan - TAIR