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GT16002

CSHL Arabidopsis genetrap mutant lines

Original: GT16002

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16002

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30410730 [Map]; Strand: w
      • AT1G80940.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 0; Region: exon1 (5UTR)
      • AT1G80940.2 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT16002 - 5-prime edge 
    CCTACGAGTT GCATGAAAAT TTAGCATTGG AATAAAGAGG GAATACGATA 
    AGACAACTAT TTTCGACTTC TGATTTTTTT CTTTTTGTAA GAATAAAAAA 
    CATTTTCACA AGCCTCTGTA GCTGAAGCAC AAAGCAAAAG CATTTGGTAG 
    TCGTAACCAA AACGCCAAAT CATTACCGTT CAACTGAAAT CTAACAGAGA 
    GCCCTCTTCT CTTGGGAATT CGATTCCTTG TACGTTATCT TCTTCTTCTT 
    CTTCTCTTTC TCAAAATTCG TGTATCTTCT GGGAAATTTT CAGATTTAGA 
    TGGAGAAAGG GGTTGGATTT GAGAAAGACA TGAAGACAGT GAGTGATGGG 
    TTTGTCGGAG GTTTTTTCCC TGTCTCTACC ACCAAGATCG CGTGGAAATC 
    AAGAAAAAGA TCAGGTTTTT TCCACTGTTT CTTGTTTTCT CAGACCATTA 
    AAGATTCTAG ACCTTTATTA GCTACCCTTT CTATTTCTGG TCTGAAAGAT 
    TTGGAATTTA TTTAAGCAGA CTGAAATCAT CAATTGTTTT AGCTCTATGT 
    GAACTATTTC CTCGAGATCT AGACATGGAG CTTTAGTCT

AT1G80940.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80940.2

Model type
Protein coding
Computational Description
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR