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Mutant Lines
GT16021

GT16021

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT16021

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 4113318 [Map]; Strand: c
- AT3G12915.2 - [+] show detail - Ribosomal protein S5/Elongation factor G/III/V family protein
  Distance: 0; Region: exon3 (CDS)
- AT3G12915.1 - [+] show detail - Ribosomal protein S5/Elongation factor G/III/V family protein
  Distance: 0; Region: exon2 (CDS)

ACTTTCTCCC TGGTTCTGCC TCATCAGCAC GAGTATCAGT CATACGCACA 
TCACCCGCAG TTTCTTGAGC AATGATACCA GCAGCAGCAA CAAGTGAATC 
CGTAAGTGTA GATTTCCCTA TCATTAAAAG ATCACAAAAC TTTTATTTAG 
TATCAAGTTT GATAGAAAAA ACACATGCTT AGCAAACATA TGTATAAAAG 
AGCAAATATT TCATCAACTA AAAAGAAACA GAACTATATA AATAAAAGAT 
ATATAAAATA AAATCGTTTT TTTATGTTAT GTTATACTTT AACATCAATA 
AGCCATAAAA ACAGAGTGAT ATGAGATTCA TATACAACGA ACAATTTTTA 
AAGAGATAAA TACCATGATC GACATGGGCG ATGACAGACA TGTTACGGAT 
GTTGTGTTTA CGATCCGTAA TTTTCCGTTG CTCTTCAACT GTAAACTTCA 
CCTGCAAGAT TTTTTAACAA AAACGGTGTT AAACAAAACA CAAGGGAGAT 
CACTACACAA AAAATAAATG AATAGTACTC TGAAAGAAAA GAAAAAAAGC 
TTACCCATCT TGACTTGCTT TTTTC

AT3G12915.1

Model type: Protein coding
Short Description: Ribosomal protein S5/Elongation factor G/III/V family protein
Computational Description: Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 62937 Blast hits to 55974 proteins in 4670 species: Archae - 1189; Bacteria - 40681; Metazoa - 3235; Fungi - 1899; Plants - 1092; Viruses - 1; Other Eukaryotes - 14840 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G12915.2

Model type: Protein coding
Short Description: Ribosomal protein S5/Elongation factor G/III/V family protein
Computational Description: Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1).
Link: InterPro Scan - TAIR