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GT16028

CSHL Arabidopsis genetrap mutant lines

Original: GT16028

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16028

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 158001 [Map]; Strand: w
      • AT2G01320.3 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G01320.2 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G01320.4 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G01320.1 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16028 - 3-prime edge 
    ATGAAACGGT AGAGGTTTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    GTTGGCGGGG CTCTGGCTGC GGTGGCCGCC GCTCTGTTGG TCCGCCTCTT 
    CGCTGGACCT GGCATCGCTC TCTTACCTGA AGACGAAGCT GAAGATGATT 
    ACGCTGAGAC GGAAGACGGT GGTGGTGATT CAATTCGTCC GGTGACAATC 
    CGTTGGAGGA ACATCACCTG CTCGCTCTCC GATAAGTCCT CCAAATCGGT 
    GAGCACATTT CTCCCTCACT CGACCAGTTN CGATTGCGCG TATATTAGTC 
    TTTCCAATTT CACGTTAATA GCCGAATCAG AATTGGTTGA TTATGTGATT 
    CTCAGGTGAG GTTTTTGTTG AAAAATGTAT CCGGAGAAGC AAAACCTGGG 
    AGGTTGCTAG CGATTATGGG TCCTTCTGGT TCTGGGAAAA CAACATTGCT 
    CAATGTTTTA GCAGGACAGC TTAGTTTATC TCCACGTTTG CATTTGTCAG 
    GTCTCTTGGA GGTTAATGGC AAACCGAGCT CTAGCAAAGC TTATAAGTAT 
    GTCCTATGAG TTATACAAAG TCTATATTTG TGTGAAAATC TGATCATTGT 
    TTGAGAGAGT TTCTTGCAAT GGCAGGCTTG CGTTTGTGAG ACAGGAGGAT 
    CTCTTCT

AT2G01320.1

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387535 Blast hits to 354405 proteins in 4108 species: Archae - 7090; Bacteria - 308145; Metazoa - 8600; Fungi - 6710; Plants - 5407; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.2

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387358 Blast hits to 354249 proteins in 4108 species: Archae - 7085; Bacteria - 307995; Metazoa - 8597; Fungi - 6708; Plants - 5391; Viruses - 19; Other Eukaryotes - 51563 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.3

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387349 Blast hits to 354243 proteins in 4108 species: Archae - 7085; Bacteria - 307989; Metazoa - 8597; Fungi - 6708; Plants - 5387; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.4

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR