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GT16038

CSHL Arabidopsis genetrap mutant lines

Original: GT16038

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16038

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 864258 [Map]; Strand: w
      • AT2G02960.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT2G02960.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT2G02960.3 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT2G02960.4 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT2G02960.5 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT16038 - 3-prime edge 
    TTTCTACAGA TTCTCTCCTC CTAATTCAGA GACGACAAAA CGCTATAAAC 
    AACATTTTTA CAGGGGATGA TTTTCTTCGA TTCTGTATCT TAAATCTGAG 
    TTTCAATTTC TGATTCCTAT CTCCGATTTG ATCGCCGGAA AAATTATTGG 
    TTATGTGGTT TCGAATATGT CAGAGCGATT CAATTCGATT AGATTAGATC 
    TCATATGGTT CTGATTTCGT TAGGGATTTC ATTTGGATTT TTGTTCGATT 
    TTTTCGTTGA ATAGTTTGGA GGAGGAAGGA GAAATGATAG GTTTATTAAC 
    TGAGAGTAGC AGCAGTCATA TGGTGGTAAA TGTGGATGGG TTGATGCGTC 
    CGATACCGAT GTCTCCGGTT AATGCGGAGG TTGAGGAGAT GAGATCAGAG 
    TCGCCGGTGG TTAATGATAA GGCGTTAGAT ATTTCTGATG ATGATCGTGA 
    TGATGAGAAT GAACCGCTTA TTGT

AT2G02960.1

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 1768 Blast hits to 1768 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 759; Fungi - 135; Plants - 605; Viruses - 31; Other Eukaryotes - 238 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02960.2

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 1768 Blast hits to 1768 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 759; Fungi - 135; Plants - 605; Viruses - 31; Other Eukaryotes - 238 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02960.3

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02960.4

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02960.5

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR