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GT16051

CSHL Arabidopsis genetrap mutant lines

Original: GT16051

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16051

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26672670 [Map]; Strand: c
      • AT5G66810.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: CTLH, C-terminal LisH motif (InterPro:IPR006595);...
        Distance: -256; Region: promoter
    Flanking Genome Sequence: GT16051 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    ACATATAATG GCAATGCAGC GAGAAATTTA CATGGTTTCC TAAAATATTG 
    AAAGGCCCAA AAATTATTGT TTGGTCTTGT TGGGCCTGAA ATGGAAATAA 
    GCAAATACAT ATTCATATTT TTTTATTTTT TTTCAAAGAA GATATTCGAT 
    ATTTATCAAC TGATATAAGA TAAGCTATTG GGCTTCTATT TTAACAGTTG 
    TAACCCGCCA GTAAAAAATG CGCTAGCTTA TATTATTACC GTGACTCGAT 
    CTTTCAAAAT GCCACGTGGC ATTTATTATG TGGATTTGGA TTTTCTAACT 
    TGTTCTCCTC ACGAAACAAA ATTCACCCAC ACAAGACAAA GCGATCGTCG 
    ATCCCACCCA CAATCTAAGA TCGCCGGCCG ATTCTCGTCG CCGACAAAAG 
    AAGAACCGAG GAAGAGGAAA GCAACTATGG ATTCCACACC TGTAAATTGG 
    GAAGCGCTTG ATGCTCTCAT CATCGATTTC GTTAGCTCTG AAAACCTGGT 
    TGAAGACGCC GCCGCCGCCG TCAATTCACC TCCATCTCCA TTATCGTCTC 
    CTTCTTCTTC TTCATCTCCT TCTATTTCCT C

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26672616 [Map]; Strand: c
      • AT5G66810.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: CTLH, C-terminal LisH motif (InterPro:IPR006595);...
        Distance: -310; Region: promoter
    Flanking Genome Sequence: GT16051 - 5-prime edge 
    CTTTCTCCCT GATTATATGG GGAAACTGCA ATAAAGAAAC GCTAGTAATT 
    TTTATATGAC ATATTTCTGA ATCTCTGAGG CATAGTAATC ACTAGATAAC 
    ACAGTCAACG AGAGAGAAGT TGGAGTTGAA TGGTAATAGC TAATAACGAA 
    TGGACAGACA ACAGATGTCT AAAGACGAAG ACAATAGACA TATGCGTTGC 
    TTCAATTTTA AAAAACAACT GGAACTTAAA TTTTCTGAAC TACTCACACT 
    CTGTTCTTCT TTTTTTCTTT TGTACAACGA CAAAAAAAAA AAATTCCTTC 
    CTTTCAAAAA GGCCAAAAAA AAAAATTTTA AACCCCCCCC CTTTCAAAAA 
    AAAAGAAAAA ACCAGGTTAA AACCTCAAAA AATTCATTAA ACCTTGGGTG 
    GGGAAAAACA TTAAAGAAAA AAACCCTTCC CCGCAAAAAA CCCAAAAGGG 
    CTTTTTTTTT AAAAATTTTT CCAAATCAAA AATAAACAAA ATTCTAATTT 
    TAAAAAATTT GGAAACCCCC CTTTTCCCAA AAAAAAAAAA ACCCAGGGAA 
    AGCCTTTTTT GGTT

AT5G66810.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: CTLH, C-terminal LisH motif (InterPro:IPR006595); BEST Arabidopsis thaliana protein match is: LisH and RanBPM domains containing protein (TAIR:AT1G61150.1); Has 333 Blast hits to 242 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 47; Plants - 152; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR