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Mutant Lines
GT16103

GT16103

CSHL Arabidopsis genetrap mutant lines

Original: GT16103

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16103

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 302864 [Map]; Strand: c
  - AT3G01850.1 - [+] show detail - Aldolase-type TIM barrel family protein
    Distance: -826; Region: promoter
  - AT3G01850.2 - [+] show detail - Aldolase-type TIM barrel family protein
    Distance: -826; Region: promoter
  - AT3G01860.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: respo...
    Distance: 0; Region: exon1 (5UTR)
  - AT3G01860.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: respo...
    Distance: -854; Region: promoter
Flanking Genome Sequence: GT16103 - 3-prime edge
```
TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTATCCCTAA 
TCATCATATG GGTTCGTGTG TCTCCTCTTC TCAAAGCAAG AGCTCATCCG 
CCTCTGATTC CGTCGTGAAG CTTGCCTCTT TCA
```

5 prime edge [+] show sequence

Chromosome: 3; Position: 302810 [Map]; Strand: c
- AT3G01850.1 - [+] show detail - Aldolase-type TIM barrel family protein
  Distance: -772; Region: promoter
- AT3G01850.2 - [+] show detail - Aldolase-type TIM barrel family protein
  Distance: -772; Region: promoter
- AT3G01860.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: respo...
  Distance: 0; Region: exon1 (5UTR)
- AT3G01860.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: respo...
  Distance: -908; Region: promoter

TACTTTCTCC CTGATGATGA TGATGATGAT GTGAAAGAGA GAGAATTCCT 
GTGGTTTAGG AGAAGAAGTG AAGATATGGG TTTAGAGAAT CTAAAAGGCA 
TAGAGAGATG GAAGACGAAG AAGCAAAGAT GAGAGGAAAG AGAGAGAGTA 
GCTTTGGAAT GGGAGGGCTT GGAAGTGAAG TAAATGGACG ACCCAAAAAG 
GAGCAGTTTC CGATTTGGTA TGTGTCTTAA TTGTCTCTTC AGTGAATTCT 
TATTTAGGTT ATGGCTTCTT ATTGGTCCTC ACATTCATAT TGTGGGCTCC 
CCTCCTTTAA AAATAAATAA TAATCAAATC TTCCTAATTT TCTGATTAAT 
TATTAGTCAT TTTGATGATG TTGTTGTGTT TCATGCTCTC AGGTCTCACA 
AATGTATGTC GCAATCGCAT CTAATTGGAA ATATCTAGAT TTTTTTTTTG 
GGGGTCCAAA AAAATATTAG GTAAATTTCC ACCAAGTTTG GTTAAGAATA 
AATGGACCTG GAGGGGACTT GACAAATAAT TCCCTTATTT AAGGGAAAAA 
AAAAGATCTT TAGTTCGTTG CCCCCCAACC AAAAAGGAAG GAAGGAAAAG 
GGGCCATTGG GCCCAACTGT TTGGGGGGGA ATAAAAAGGG CCCGGGCCGT 
TGAATAAATA AAACCCTTTA AAAAAAAAGG CCGCCTCTCT CAAATGGCAA 
AACCCCCCC

AT3G01850.1

Model type: Protein coding
Short Description: Aldolase-type TIM barrel family protein
Computational Description: Aldolase-type TIM barrel family protein; FUNCTIONS IN: ribulose-phosphate 3-epimerase activity, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate 3-epimerase (InterPro:IPR000056), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G63290.1); Has 9076 Blast hits to 9073 proteins in 2640 species: Archae - 49; Bacteria - 5613; Metazoa - 177; Fungi - 138; Plants - 141; Viruses - 0; Other Eukaryotes - 2958 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G01850.2

Model type: Protein coding
Short Description: Aldolase-type TIM barrel family protein
Computational Description: Aldolase-type TIM barrel family protein; FUNCTIONS IN: ribulose-phosphate 3-epimerase activity, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate 3-epimerase (InterPro:IPR000056), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G63290.1); Has 9076 Blast hits to 9073 proteins in 2640 species: Archae - 49; Bacteria - 5613; Metazoa - 177; Fungi - 138; Plants - 141; Viruses - 0; Other Eukaryotes - 2958 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G01860.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G01860.2

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR