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GT16119

CSHL Arabidopsis genetrap mutant lines

Original: GT16119

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16119

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1870526 [Map]; Strand: w
      • AT2G05170.1 - [+] show detail - vacuolar protein sorting 11
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16119 - 5-prime edge 
    CCTGATCTTG ACAAAGTTCA GGAGGAAGCC ACTAGTTCCT CGGCTCCTGA 
    ATGCATTGGT ATTCTTAGAA TTTTCACCAA TCAGTTTCCT GAAGCTAAGG 
    TAATAATCTC TTCTCTGTTA TAATACTTGA CGTATATACT GAGGTTTGAT 
    GATGGAATAT CATGTGTAAT TGCAGATTAC TTCTTTTCTA GTCTTGGAGG 
    AAGTTCCACC AATATTGCTT ATAGCCATTG GCTTAGATAA TGGCCACATT 
    TATTGTGTCA AAGGAGACAT T

AT2G05170.1

Model type
Protein coding
Short Description
vacuolar protein sorting 11
Curator Summary
Homologous to yeast VPS11. Forms a complex with VCL1 and AtVPS33. Involved in vacuolar biogenesis.
Computational Description
vacuolar protein sorting 11 (VPS11); FUNCTIONS IN: transporter activity, binding, zinc ion binding; INVOLVED IN: vacuole organization; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 11 (InterPro:IPR016528), Zinc finger, RING-type (InterPro:IPR001841), Armadillo-type fold (InterPro:IPR016024); Has 716 Blast hits to 615 proteins in 203 species: Archae - 0; Bacteria - 2; Metazoa - 251; Fungi - 269; Plants - 42; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink).
Link
InterPro Scan - TAIR