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GT16122

CSHL Arabidopsis genetrap mutant lines

Original: GT16122

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16122

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 412227 [Map]; Strand: w
      • AT4G00955.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16122 - 5-prime edge
    CTTTCTCCCT GTTTACGGAA GGTGATGAAT GTTGAGATCG ATTCAATCAA 
    CGTTCAACGA AGATGGTGAT GATTTCTTAT AAGTTAAATT TGGTTTTGAT
    CATAATCTTG ATCGGAGGAT CTTTTAACGA CCTACGAGTT TCTTCTGCCG
    CGGCTAATTT GACCGAAACT TGTAACGGAA TATGTGGTGG ATTGACTCTG
    TCTTATCCCT TTGGGTTTTC TCTTGGTTGT CCGATCCAAT TCAATTGCTC
    TGCTGCGGGC CAAGGGGCGA AGATCGGAGA GTTTCCCGTC CAAAACGTGA
    CGGAAAACAG TATATTGGTC GGCGTTCCAA CCAATTGTAC TCGGAAGATT
    GAAGACATGA CTCCGCTTTT CGGCAAGCAG TTCACACCAT CGTCGGAGAA
    CAGTTTCTTT TTTTTTTTTT TTTTTTTTTT TTNNCAAAAC CCCCCCCCTT
    TTTTTAAAAA AACAAAATTT TTTAAAACGC CCCCCCCGGG GGGAAAAAAC
    CCCCCCCCCC CCCAAAAAAA AAATTTTCAC TTTCCCCCAA AATTTTTTTG
    GAAAAACCCC CCCCCCCCCC CCCAAAAAAA AAACCCCCGG GGGGATTCTC
    TCCCCCCCCC AAAAAAAA

AT4G00955.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G23450.1); Has 94 Blast hits to 88 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR