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GT16223

CSHL Arabidopsis genetrap mutant lines

Original: GT16223

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16223

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 158133 [Map]; Strand: c
      • AT2G01320.3 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT2G01320.2 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT2G01320.4 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT2G01320.1 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT16223 - 5-prime edge 
    TCCATCCTAC TTTATCCCTG ATGTTTGGAG TCTTGGTTGG TTCTTACTTG 
    TTACTTTGCT TCGTACGGAT TTGAAGGCTT TACCTCACCG GAGCTTCCAA 
    GTAGAAGACG ACACTGAGTC ACTGACACAG GGATACAAAT TATGGCGCCT 
    TTTGGCGGGA AATCTTTAGC GGACGTTGTT TCTGGCATCG GAGGGAATGG 
    TGTTGGCGGG GCTCTGGCTG CGGTGGCCGC CGCTCTGTTG GTCCGCCTCT 
    TCGCTGGACC TGGCATCGCT CTCTTACCTG AAGACGAAGC TGAAGATGAT 
    TACGCTGAGA CGGAAGACGG TGGTGGTGAT TCAATTCGTC CGGTGACAAT 
    CCGTTGGAGG AACATCACCT GCTCGCTCTC CGATAAGTCC TCCAAATCGG 
    TGAGCACATT TCATCTCACT CGA

AT2G01320.1

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387535 Blast hits to 354405 proteins in 4108 species: Archae - 7090; Bacteria - 308145; Metazoa - 8600; Fungi - 6710; Plants - 5407; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.2

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387358 Blast hits to 354249 proteins in 4108 species: Archae - 7085; Bacteria - 307995; Metazoa - 8597; Fungi - 6708; Plants - 5391; Viruses - 19; Other Eukaryotes - 51563 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.3

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387349 Blast hits to 354243 proteins in 4108 species: Archae - 7085; Bacteria - 307989; Metazoa - 8597; Fungi - 6708; Plants - 5387; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.4

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR