1. Home
  2. Mutant Lines
  3. GT16228

GT16228

CSHL Arabidopsis genetrap mutant lines

Original: GT16228

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16228

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9665964 [Map]; Strand: c
      • AT4G17230.1 - [+] show detail - SCARECROW-like 13
        Distance: -2190; Region: intergenic
      • AT4G17240.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 629; Region: intergenic
    Flanking Genome Sequence: GT16228 - 3-prime edge 
    ACGGTAGAGG TATTTTACCG ACCGTTACCT TCCGTTTTCA TCCCTACCTT 
    ATAGTATTAT AGTTAATTTT CGGTATAGCA ATGGGAAAGT TTTTGTTATA 
    ATGTTGTTCT TTATAAAAGA AAACTTTGTT AATAGAATAA CTAAAATATA 
    TTGGTATCTC TGAAAATTGT TTTTATTGCA TCTTTGGTAA TTAACGAGAT 
    CTAAATCGTG TTAATTATAG TGGTAAATAA ATGTCTAGTT CATCACTTGA 
    ACCTCCATAC ATAAATGTAA AAGTGACATC TTTGTGATGA AATTTTGGGT 
    GTTGGAGGTT AATGTTTATT TGAGAATCAA AAATAGGATG TCAAAATTGA 
    TGGTAAACAA ATAATCATAG TTATGGAGGA AACTAAGACA GAAATGAGGG 
    AGACATTGAG CATGAGAAGA AAAAAAAAAA ATTGGGAGTA ATAGGGGGGA 
    GGGAAAGGAA AATGAGTAAG GTAAATTTAA GGTTTGTCCC CCAATTTCCC 
    AATTTTAAGG ATTTTGCAAA TATTGAAAAG GCCAAAGCAT GTTTCTTGAA 
    AAAAGGGATG GAGTATCAAC ATCTTCTCTA GACTCTCTAA TAAACAACCC 
    TCCTAAGGAT AATTTAACCA AGG

AT4G17230.1

Model type
Protein coding
Short Description
SCARECROW-like 13
Curator Summary
Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family.
Computational Description
SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G17240.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages.
Link
InterPro Scan - TAIR