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GT16232

CSHL Arabidopsis genetrap mutant lines

Original: GT16232

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16232

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 414929 [Map]; Strand: c
      • AT4G00960.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT16232 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTACT 
    TAAAACACTA AACGCAAGCA TTTCTATCTC TAGTAACTAA TAAAAATGAA 
    TTTCTCATAC TTATATCGTT TTCTTTTTTC AGATTCTGAT AGAAGAATGA 
    TCTTAGATTG GGAAACACGT TATAGGATTA TCTCAGGTGT TGCTCGAGGT 
    CTTCTCTATC TCCATGAAGA TTCTCATTTC AAAATTATTC ATAGAGATAT 
    GAAAGCTAGC AATGTTCTAT TGGACGATGC AATGAATCCG AAAATCGCAG 
    ATTTTGGGAT GGCAAAATTG TTTAATACTG ACCAAACAAG TCAGACCATG 
    TTTACAAGCA AAGTTGCAGG AACTTAGTAA GCTGCCCAAA AAGTACCCTT 
    TTAGTACTAC CAATTCTATG AAAAAAGATT TTTAAAAACC ATTTTTNTTG 
    GGTCGTTGCA GCGGTTACAT GGCTCCTGAG TATGCAATGA GTGGGCAATT 
    CTCGGTGAAA ACCGACGTAT TTAGTTTCGG TGTACTAGTC CTTGAGATCA 
    TTAAAGGTAA GAAAAACAAT TGGTCTCCGG AAGAACAAAG CTCATTATTC 
    CTCCTTAGCT ATGTAAGTGA AAAATATTAT TGTGTAATTT TGATTTTTAT 
    GCAAATAAAC TCTCAAAGTC TTCTATTTTT ACAATTTTAC TCTCTACGTC 
    CAAAATAAAA AAATATACAA AATAATCATA TGAAGTCAAA ATTAATACGC 
    AATATAGCCG ATTTTTGCAC TT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 414874 [Map]; Strand: c
      • AT4G00960.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT16232 - 5-prime edge 
    CCTACTTTCT CCCTGGTTTT AGGTATTCAT ATGAACTTTT CGAGGCTTGT 
    GTTCTTAAAG AACTCATAGA TGAGAAGTCG TTCTTCTCCT TTAAAACAGA 
    AACCTAAAAG CCTAACAAGA TTACGATGTT GAAGTTTCGC AACCAATGAG 
    ACTTCGTTTA CGAACTCATT GTCTCCTTGT CCTGATTTCA TTGACAATCT 
    TTTCACAGCT ATCTCTTCCC CGGAATCAAG GACGCCCTGG TGTTTATTGA 
    AACACATGTT AGAGAGAAGT CTTTAGTTGC TAATCTTATG GTATAAGTAA 
    AAATCAGTTA ATCAATCATT CACCTTATAA ACTGCACCGA AACCACCTTC 
    ACCAAGATGG TTGTAAGGAG AGAAGTCATT AGTTGCTAAT CTTATGGTAT 
    CAAAGTCAAG TTGCAATAAT TTTGCATCTT TAATCTTCTG ATCCTTCGAC 
    ATATTTGCCT GATCCCAAAG CAATAAAACA AAAAGTGTCT TTTAAAATTA 
    AAACTCTCAA AAAAAAAAAA AAAAAAAAAA ACCCCCAAAA AAAAAAGTTT 
    TTCCCCCCTT TTAAAAAAAA AA

AT4G00960.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf; EXPRESSED DURING: LP.10 ten leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 41 (TAIR:AT4G00970.1); Has 115688 Blast hits to 114341 proteins in 4243 species: Archae - 87; Bacteria - 12866; Metazoa - 42714; Fungi - 9727; Plants - 32895; Viruses - 425; Other Eukaryotes - 16974 (source: NCBI BLink).
Link
InterPro Scan - TAIR