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GT16253

CSHL Arabidopsis genetrap mutant lines

Original: GT16253

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16253

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 373992 [Map]; Strand: c
      • AT4G00890.1 - [+] show detail - proline-rich family protein
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT16253 - 3-prime edge 
    GGTAGAGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAACGTTGA 
    TCATATATAA TAGTGATACG AAGAGACGAT TGTATTACAA TATGTGCAAT 
    TATTTAAAAC AGTGGTTAAG AAAAATCACA ACTTTGATCA TAATCGATCG 
    TCAAGTGGAC GCCTGGTTTA TGATCGATGG AAGATGAATC AAGCGAAAGA 
    GAAGTGTTGA ATCCTTGGAC GTTACTGTTT ATGAACATCA TAATCATTGG 
    CTCTGTTTTT TTCTCTAATG TTCCCCTGTT TTTCGGAACT TCGTTTTTAG 
    CCGGAATCTT GTTCATGAGG TTGGCGTCAG GTTTCACTAG ATTCTGCTCT 
    GGTGAAGCGT GAGATTCGGT GTTTGTGAGT TTTGGAGAAG GAGATTTGAT 
    TTGGTTTGGT TCAATTTGGG GTAACGATGG TTTAGGTGAC GGTGTAGTTT 
    GGGAGAGTGG TGAAGAAAAC GGCGGCGCTG GTGCGGTGAT CGTAGCTGGA 
    GAAGGAATT

AT4G00890.1

Model type
Protein coding
Short Description
proline-rich family protein
Curator Summary
Encodes a putative glycosyl hydrolase family 10 protein (xylanase).
Computational Description
proline-rich family protein; Has 74402 Blast hits to 44432 proteins in 1604 species: Archae - 100; Bacteria - 7075; Metazoa - 32308; Fungi - 16616; Plants - 5983; Viruses - 2030; Other Eukaryotes - 10290 (source: NCBI BLink).
Link
InterPro Scan - TAIR