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Mutant Lines
GT16406

GT16406

CSHL Arabidopsis genetrap mutant lines

Original: GT16406

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16406

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT16406 - 3-prime edge
```
TTTTTTTCGT TGGAAAATTA ATACTC
```

3 prime edge [+] show sequence

Chromosome: 2; Position: 18592408 [Map]; Strand: w
- AT2G45080.1 - [+] show detail - cyclin p3;1
  Distance: 0; Region: exon2 (CDS)

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCATCAA TTAGGTGATG 
ATGATGTTTA GGGTCTTGAA CAATTTGTCT AGATTTGATT TCCTCAGCGC 
AACGCAATGC TTTTTCGATC TGATAACCTC CTCCAATACT AACTTCTCTT 
TCTAGATGAC AACAGTAACT CTCGAACACA CTCACATTCA CATGCAACTT 
AAATCCCATC AAGAACAAGA ACTCCAGTTC CAAATTGTTC AAATCTTCTG 
TCTCTAATCC TCCTACTTTC GCAAAGTACG AGTTTTTGTA GTTCCTGTAA 
GAAACAAAGA TGAAGAAAAT GAGTTGGATA AAAACAGAGG ATTTTTTATT 
CAAACTTTGT TTTGAAGGTA ATTTAACTTA CATATCTTCG ACGTATTTGG 
AAGCGATCAT GATAGTTGTG ATAAGGAGAC GATGTACATT GGTAAGACTG 
ATTCTGAAAC CTTGGTTATT CTGACAGAAC CGGTCAATGT ATACATAAGC 
CACGACGTAA ACCGATGGAC CGGCTTTGGT ATACCGGAAA ATTCTCTCTA 
GGTATGATTG AATAGTCATA TCAGGAATCT CCCGGCAATC AAAGACACGT 
GTCTTACCAA AACCACCGTA GCTCCGGCTG ATTCTCTCGT TCCTAGCTAA 
AAGTCGTTCG ATCAGAGACG AGAGAACAGA GATGACTAGA GGTACT

5 prime edge [+] show sequence

Chromosome: 2; Position: 144747 [Map]; Strand: w
- AT2G01275.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: -223; Region: promoter
- AT2G01275.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: -459; Region: promoter
- AT2G01280.1 - [+] show detail - Cyclin/Brf1-like TBP-binding protein
  Distance: -929; Region: promoter

TTTACCGACC GTTACCGACC GTTTTCATCC CTATATGCAT ACATATACAC 
GTGGTTATTT CATCACTAAT TAATATATGG CCAACAGAAA ATGCCTTGGA 
AAAACAAATA GATGAAACTG ACAACAATCA ATAGTAGTAT GTTATGGATG 
AAAGAAAGAA AAGAGAGTAA CCCACAACGA TGTAACTTTT TCAGTGTAAT 
AAAAAAGCAG TTTGACGACA AAAAAAAAAG GTAACAATTG GTGGAATAAT 
GGAAGGAGAA CCCGGGTAAG GGTGGCAATG GGAAACGGAA TCCCGGGGAA 
AGGAGGGGGG ACATCTTTTG ACCGGTGGAA ACCTACCCCC TACTTAAAAA 
AAAAAAAAAA AAAATTCCCC CCCCCCCCCA CCGGGGGCTT TTTTTTTTTT 
TTTTTAAACC CAGGGAGGGG GGGGGGGGGT TTAAAACCCG GGGGTTTTTT 
GGGGGAAAAA AAAAGGGGGG GAAAAAATTT TAAAAAAGGG GGGGGTTTGG 
GGTTTAATTT TTTCGGGAGG GGCATTTGCC ATTTTAAAGG GGGGTTTTTT 
CGGGAAAAAA AATTTTTTAA AAAATTAGGG GCCGGGGGGC CCACCCCAAA 
AAAAAATTAA AAATAAACCC C

AT2G01275.1

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G38070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01275.2

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G38070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01280.1

Model type: Protein coding
Short Description: Cyclin/Brf1-like TBP-binding protein
Computational Description: maternal effect embryo arrest 65 (MEE65); FUNCTIONS IN: RNA polymerase II transcription factor activity, cation:chloride symporter activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670), Brf1-like TBP-binding (InterPro:IPR011665); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT3G09360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G45080.1

Model type: Protein coding
Short Description: cyclin p3;1
Computational Description: cyclin p3;1 (cycp3;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin p3;2 (TAIR:AT3G60550.1); Has 1274 Blast hits to 1274 proteins in 212 species: Archae - 0; Bacteria - 18; Metazoa - 174; Fungi - 605; Plants - 231; Viruses - 0; Other Eukaryotes - 246 (source: NCBI BLink).
Link: InterPro Scan - TAIR