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GT16418

CSHL Arabidopsis genetrap mutant lines

Original: GT16418

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16418

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29512656 [Map]; Strand: w
      • AT1G78440.1 - [+] show detail - Arabidopsis thaliana gibberellin 2-oxidase 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16418 - 3-prime edge 
    TCCACTATTT CCAAGTCTTC TCAAAAGCCC GGGAACTTTC AGGTTTTTAA 
    ATGTCCCTTG CTTTGATAAC ACACCTTTCA TTCTCGTACT CTGTTTCGTG 
    CTCTGTTTTC GAGTTAGTGC TCTGTTTTTT GCTCTGTGTT TGTTTTTATA 
    GTTCATGTTC TATAGCTTTT TATGCTTTAT TCTGGATTTT TTTTGTGGTT 
    ACGTCTCAAG TTTTGTTCTT TAATCTTCAG AAACGCATTG GAAGAGTACA 
    CAACATCAGT GAGAAAAATG ACATGCGATG TTTTGGAGAA GATCACAGAT 
    GGGCTAGGGA TCAAACCGAG GAACACACTT AGCAAGCTTG TGTCTGACCA 
    AAACACGGAC TCGATATTGA GACTTAATCA CTATCCACCA TGTCCTCTTA 
    GCAATAAGAA AACCAATGGT GGTAAGAATG TGATTGGTTT TGGTGAACAC 
    ACAGATCCTC AAATCATCTC TGTCTTAAGA TCTAACAACA CTTCTGGTCT 
    CCAAATTAAT CTAAATGATG GCTCATGGAT CTCTGTCCCT CCCGATCACA 
    CTTCCTTCTT CTTCAACGTT GGTGACTCTC T

AT1G78440.1

Model type
Protein coding
Short Description
Arabidopsis thaliana gibberellin 2-oxidase 1
Curator Summary
Encodes a gibberellin 2-oxidase that acts on C19 gibberellins.
Computational Description
Arabidopsis thaliana gibberellin 2-oxidase 1 (ATGA2OX1); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase (TAIR:AT1G30040.1); Has 8410 Blast hits to 8364 proteins in 975 species: Archae - 0; Bacteria - 1063; Metazoa - 88; Fungi - 964; Plants - 4898; Viruses - 0; Other Eukaryotes - 1397 (source: NCBI BLink).
Link
InterPro Scan - TAIR