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GT16463

CSHL Arabidopsis genetrap mutant lines

Original: GT16463

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16463

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14675217 [Map]; Strand: w
      • AT2G34790.1 - [+] show detail - FAD-binding Berberine family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16463 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAGTTAACA 
    GGATCCAAGA GAAAAGCCAA ACCCATGGTT TTCCGGCCGG TTTATGCTCA 
    AGCCTTGGCA TCGGTGGCCA CTTAGTCGGT GGAGCGTACG GTTCCATGAT 
    GAGGAAGTTC GGTCTCGGCG CTGACAATGT CCTCGACGCC AGAATCGTCG 
    ACGCCAACGG CCAAATCCTC GATCGCGCGG CAATGGGAGA AGACGTCTTC 
    TGGGCGATTC GCGGCGGCGG CGGTGGTAGC TTCGGCGTGA TATTGGCCTG 
    GAAGATTAAG CTCGTCCCCG TTCCGGCGAC CGTTACGGTA TTCACAGTCA 
    CGAAGACGCT TGAGCAAGAC GGAACTAAAG TTTTATACAA ATGGGAACAA 
    ATCGCTGATA AGCTTGACGA TGATCTCTTC ATTCGCGTCA TTATTTCACC 
    GGCCAGTAAA ACCACCAAAC CGGGAAATCG AACCATCTCG ATGTCGTACC 
    AAGCTCAGTT TCTCGGAGAC TCCAATCGGC TCTTGCAGGT ATGATAGTGT 
    TCAAATCCAA ACTTAAGGGT CTAAATTTGA ACTCTTTTAT CTTTTCGGTT 
    TTAACAATTC AAGCAATAAA CTTTTAAATT TGTAAATTTC AACCACAACA 
    GGTGATGCAG AAGAGTTTCC CTGAGTTAGG ACTGACGAAG AAGGACTGCA 
    CAGAAATGAG CTGG

AT2G34790.1

Model type
Protein coding
Short Description
FAD-binding Berberine family protein
Computational Description
MATERNAL EFFECT EMBRYO ARREST 23 (MEE23); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: polar nucleus fusion, embryo development ending in seed dormancy; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30760.1); Has 4988 Blast hits to 4831 proteins in 776 species: Archae - 82; Bacteria - 2407; Metazoa - 5; Fungi - 1644; Plants - 646; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink).
Link
InterPro Scan - TAIR