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GT16466

CSHL Arabidopsis genetrap mutant lines

Original: GT16466

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16466

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30129232 [Map]; Strand: c
      • AT1G80080.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G80090.1 - [+] show detail - Cystathionine beta-synthase (CBS) family protein
        Distance: -872; Region: promoter
    Flanking Genome Sequence: GT16466 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    AGTCGTCTGA GAGCGCTCCG AACGACAGAG AGACCACGTG GTAGACGTTA 
    TCCTGGTCCG GCATACACTC GATCCCGTGC CATCTCCCTC GGCAAACGTC 
    TGGAATCGCG GCAGCCCAGT CGTTGCCGGT CGCACGCATA ATGTCGTAGA 
    CGGCGTCTTG CTCGTCAGGC TCCGTGCGAG CGCCGTCATT GGTCATCGTG 
    AATCCAGTTT GTGGGCCGTC GATCAGAGCA GATGGGGCCG TCGAGTCGGA 
    GGTGATCACA GTGAAAGATC TGACCAACGG AGAAACTATA GACAAGACAA 
    TGAATATTTG GCGGAAGAAT TCATATCGTG CCATTTCTTA GTTGTTGTTG 
    TTGTGTGAAT GCGGTTTAGG TTCGAAATTG TCAGTGTGTA TATGTATAAT 
    TCTGAAGAAA CAATTGGTGG GTCCATAAAA ACGTTCGCAA TGTCTTTATG 
    ACTTTCACGG GATAACTCGA GGAGCGAAAT AAATAAAATT CATGATTCTC 
    GATTTCTGCA TTTATTGCTT TCACGAGATA TTCCCTTCAT TCGTCTTGTG 
    TTGGGCCCTA GATCCGACCG CTTCGTGAAC GGGACCCGAC GTCTCCTTAT 
    CGTTTACTTT TTTTTTATTT GGGCTGAGCC CATTTTCCCA TTTACGATAT 
    GTTGGGCTAT TATTCAATTT GTATTTTGAA CTGGGCACTG TATTTGTTTT 
    TGTAACAAAC CGTAGATAGC AATTGATAAA AAGTTTCATA TGTTTGAT

AT1G80080.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Curator Summary
Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development.
Computational Description
TOO MANY MOUTHS (TMM); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 29 (TAIR:AT2G42800.1); Has 88991 Blast hits to 28047 proteins in 1079 species: Archae - 16; Bacteria - 3330; Metazoa - 23111; Fungi - 805; Plants - 56845; Viruses - 0; Other Eukaryotes - 4884 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80090.1

Model type
Protein coding
Short Description
Cystathionine beta-synthase (CBS) family protein
Computational Description
Cystathionine beta-synthase (CBS) family protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) protein (TAIR:AT1G15330.1); Has 517 Blast hits to 517 proteins in 144 species: Archae - 0; Bacteria - 47; Metazoa - 83; Fungi - 146; Plants - 195; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Link
InterPro Scan - TAIR