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Mutant Lines
GT16489

GT16489

CSHL Arabidopsis genetrap mutant lines

Original: GT16489

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16489

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 183225 [Map]; Strand: c
- AT4G00420.1 - [+] show detail - Double-stranded RNA-binding domain (DsRBD)-containing protein
  Distance: 0; Region: intron2 (5UTR)
- AT4G00420.2 - [+] show detail - Double-stranded RNA-binding domain (DsRBD)-containing protein
  Distance: 0; Region: intron2 (5UTR)
- AT4G00420.3 - [+] show detail - Double-stranded RNA-binding domain (DsRBD)-containing protein
  Distance: 0; Region: intron2 (5UTR)

TTTACCGACC GATACCGACC GTTTTCATCC CTAAAATAAA TGCACAGTTA 
CAGAAAGAAC AGTGGCTATT GCAATGAAGT AACCAAAAAG GAAAATAAAA 
AGGAGAGACA GTTATCTAGG AGCTCACAGT TATGGCAAGA AGCTGAGCTT 
TTGGATTCCT GCTACCAATC CGTTCTTTAA ATGCCTTTCA CAACATCTTT 
TGCTTGCCTG CAAAACAGCA ACCGCTTTCA GACACCACAT AGGATCGTCC 
AATTAGTATA AACACTGAAA TATCCTTCTT CCAATCACAA AGCATAAATA 
TTTCCCAGCT TCTACAATAA AGCCCTATGA AAGATGACTA ACTTGAGCAA 
AACAGTAGGC CACAAGTATT CGAATTGGTC CTAGAAAACA TGGAAATATC 
TAACTATGGT AAAGAAACGA AATTTGATTA TCTTAACTAT CTTAACTATC 
TTAACTATCA TATATCTTTC CTCTCCTTAT CTAAAACCCT TTGATTAGAT 
TACAGAAACA ACACTTCAGA GCCTAAACAA CAATAGACAA ATATCTTCTT 
TGCCTAAACA ACAAGACAGA CCCAAATATT TAGTAGTTAA ACAGCATTTT 
GCTAACCACA CAAGACACTT CAAATCCACA CACAGACAT

5 prime edge [+] show sequence

Chromosome: 4; Position: 183151 [Map]; Strand: c
- AT4G00420.1 - [+] show detail - Double-stranded RNA-binding domain (DsRBD)-containing protein
  Distance: 0; Region: intron2 (5UTR)
- AT4G00420.2 - [+] show detail - Double-stranded RNA-binding domain (DsRBD)-containing protein
  Distance: 0; Region: intron2 (5UTR)
- AT4G00420.3 - [+] show detail - Double-stranded RNA-binding domain (DsRBD)-containing protein
  Distance: 0; Region: intron2 (5UTR)

TTTCTCCCTG ATTTTATAGC CTGCTTAAAC ATGTTTATTT AAGATGGTTA 
AGCTGGAACT AGTATGAGTT TTGACCAAAG GGAAAGCAGA TTATTTAGTT 
AAGTTTAAAG CTTTACTTGG TAAACTTCAT ACTGATTCTT TAGCTCTATA 
GAAAACAGAA CAAATCTCTT GTGTTAAAAG TTCGGTCAAA TTTGATTTCA 
GAAAAAGTCT CTGCGACAAT CTCCTAGCTT TGTCAAATTA TAAGTTTCTT 
AGCAAATGTT CAGGCAACTG AGACAATATT ATTGAATTAA GAGTGATTAT 
GCGTCGTGGT CCTGAAAGTT GTTGTTATTA TTGAATTCTT TGTATGTATA 
GATTATGTCA TGGGTCATAT GTGGTTTTGA TGGGTAACGT TTTTACTAAT 
AATAGCACTA TGCTTCTGGA TTTTGATCTA GGTGATCATT AACTAGTCTA 
TATATATGCA ATGTCTTTGA AACACTTTTT GTTGTAGTTA AAGTCTGTCT 
GATTTGTGTT GGTTTCTTAT TATAAAGGAA TAAGGTAGCT GAAGCTAATT 
AATCCAATAA AGAAAAAAAA GAATTTTCTG CTTGAAATCA ACGATGGATC 
T

AT4G00420.1

Model type: Protein coding
Short Description: Double-stranded RNA-binding domain (DsRBD)-containing protein
Computational Description: Double-stranded RNA-binding domain (DsRBD)-containing protein; FUNCTIONS IN: double-stranded RNA binding, RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 1 (TAIR:AT1G80650.1); Has 64 Blast hits to 64 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00420.2

Model type: Protein coding
Short Description: Double-stranded RNA-binding domain (DsRBD)-containing protein
Computational Description: Double-stranded RNA-binding domain (DsRBD)-containing protein; FUNCTIONS IN: double-stranded RNA binding, RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 1 (TAIR:AT1G80650.1); Has 72 Blast hits to 72 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00420.3

Model type: Protein coding
Short Description: Double-stranded RNA-binding domain (DsRBD)-containing protein
Computational Description: Double-stranded RNA-binding domain (DsRBD)-containing protein; FUNCTIONS IN: double-stranded RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 1 (TAIR:AT1G80650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR