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GT16505

CSHL Arabidopsis genetrap mutant lines

Original: GT16505

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16505

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 300349 [Map]; Strand: c
      • AT2G01670.1 - [+] show detail - nudix hydrolase homolog 17
        Distance: -2248; Region: intergenic
      • AT2G01680.1 - [+] show detail - Ankyrin repeat family protein
        Distance: -6036; Region: intergenic
    Flanking Genome Sequence: GT16505 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAATAAAG GTTCAATGAA 
    TTTCTAGATA AAACTATTAT TGTAAGTTAG ACTAATCGGG TGCATAAGAA 
    AGAAGAAGTT AGAATTATCG AATATGAAAC CTTCCTGCAA ATGTGTCGAT 
    ATGAATTGTT TTAATGGTTC AACCATCATA ATTACATTTT AGCCACCGAT 
    TTAGAATCTT TCCTCTTTAG TCACCCAAAA AGGATTTTCT TTCATCACGA 
    CACATGAAAC TTAACGCATA ATAATGACCT ATATTACGCA TCAT

AT2G01670.1

Model type
Protein coding
Short Description
nudix hydrolase homolog 17
Computational Description
nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01680.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G31820.1); Has 36872 Blast hits to 17947 proteins in 711 species: Archae - 48; Bacteria - 2509; Metazoa - 18623; Fungi - 3211; Plants - 2983; Viruses - 164; Other Eukaryotes - 9334 (source: NCBI BLink).
Link
InterPro Scan - TAIR