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GT16506

CSHL Arabidopsis genetrap mutant lines

Original: GT16506

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16506

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5371192 [Map]; Strand: c
      • AT1G15610.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron1 (CDS)
      • AT1G15610.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT16506 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTACTCAGAG ACAAGGTATA 
    AACTGTGTTT CTTTTTCTTT TTCAGGCATT AGAGACTGAT ATCCTCAACA 
    ATGGTTTTTA TTGATTTGCA GCAACGAGGT GATGGAGTAC CGTTTGGAAA 
    TTTTTCTTGA ATCTTTCTTC GTGTCCTTGA TTGTGGTGTC TTTATGGCAT 
    ATTCTAACCG AGTCATCATC ACGTCAAGAT ACTAGTCGAC ACTTCTGGTG 
    CGCATCTAAC TAAATTTACA ATTATGGCTA AACAACATAA TTTACCTCTC 
    TAGAACTAAC AAATGTCCTT TTCCAGGTTA TGGCTGGGTC TACTTGCTTT 
    CAGTTGCATT CGATATGTGC TTCCTAATTT CCAATTTACC GTACAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5371180 [Map]; Strand: c
      • AT1G15610.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
      • AT1G15610.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16506 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACTCAG 
    AGACAAGGTA TAAACTGTGT TTCTTTTTCT TTTTCAGGCA TTAGAGACTG 
    ATATCCTCAA CAATGGTTTT TATTGATTTG CAGCAACGAG GTGATGGAGT 
    ACCGTTTGGA AATTTTTCTT GAATCTTTCT TCGTGTCCTT GATTGTGGTG 
    TCTTTATGGC ATATTCTAAC CGAGTCATCA TCACGTCAAG ATACTAGTCG 
    ACACTTCTGG TGCGCATCTA ACTAAATTTA CAATTATGGC TAAACAACAT 
    AATTTACCTC TCTAGAACTA ACAAATGTCC TTTTCCAGGT TATGGCTGGG 
    TCTACTTGCT TTCAGTTGCA TTCGATATGT GCTTCCTAAT TTCCAATTTA 
    CCGTACAGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5371093 [Map]; Strand: c
      • AT1G15610.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
      • AT1G15610.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16506 - 5-prime edge 
    TTGGATATAC TGCCATAAAC GGCAACATAC AAAAGGCAAA GTGGCAATAG 
    AGGCACAAGT ATAAAAGATG ATCCATATAA ACAAAGCTAC ATCTAGTTCT 
    GGATCTCGTT CATCTTTTGT TAGAATCAGA AAAAATATGG CTGCAACAAT 
    CTGGACCAAA GTCACAGCTA ACTCGACCAA AATCCAGAAA CTTCCACTTG 
    TAAATGGACA ACTCCATTGA AATGCCTCAT GTGGAGTTTA CTCATGATCA 
    GCTGATGACG AACCGCCATT GATTGTAATG TCGATGATGT GCTCATCATT 
    TGAGGAAGAA TCGCCATGGA TTGTAACGTC TTCGACGTTG TGCTCACTCT 
    TGGTTAAATG TCACAATGAG GTAGGACTCG ACTCGAAATA AGTCAGACTT 
    TAAAAAGCCC ATTAAACTAC GGGCCCTTAA AATACATATC TGAATAGCGA 
    AAACGCACGA ATAAGAATGG TCAATCAAAA CTGTCATTTA ATGGAGAATA 
    ATATTAACGA GAGAGAAAAA TAAAATAAAA AGAGGAAATA AGACAAGATG 
    ATCATCTTTG ATCATTTCAA AAAACCTTAG CTACTGTTTT TCTCTAACTT 
    AATAAGATTA AAATCATCAA CATGAACACA ATACATTTTT ATTCTGGGAC 
    TCTGCTTTAC T

AT1G15610.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15630.1); Has 129 Blast hits to 129 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G15610.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15630.1).
Link
InterPro Scan - TAIR