1. Home
  2. Mutant Lines
  3. GT16624

GT16624

CSHL Arabidopsis genetrap mutant lines

Original: GT16624

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16624

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3794 [Map]; Strand: w
      • AT1G01010.1 - [+] show detail - NAC domain containing protein 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16624 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACCAACG AGCTCCTCGT 
    CGTTCGGACG GAACCCAAAC CCAACTTGAT CCTCCATTTT CACTAAACCG 
    TCCGATTTCA ATGGTTTCCG GGTAAAGAGC TTCGCCGTCG ATCTCTCTCG 
    CTCTCTGTAA TCTGTATTTC TCCGATTATG TATTTGTTTT CTCTGGTTTG 
    GTATATCTAA TAATTTGGAG GGAGGAAGAC AGTGAAGTCA GCGTTTAAAT 
    AAGACAATTT ATTCCTTTTA TTTTTATTTT CTTAATTAAA TTAATATGGA 
    TCTCCGGTTT AATTGGTATG GTTTTACCGG TCCTAACAAT TTTAAAGATT 
    ATTAAAACAA TTGATGGTAT GAAATTTCAT GTAGTAAACC GAGTAGTATT 
    AACTATTAAG ATTTATTAGT CTTAATCATA TTATTTTTTA CTTATGATGG 
    TTTAGAATTT TAATCAATGT AAGTAAACAG AGTTCAGATT TAAACCAATT 
    TAACAATTAA AAAAGATTTA ATAATAAATT TTATAAAATC GGTTTGGGTG 
    AACCGTGGAT TGAATATCAT CCTCTGTAGA AATTTGTATT CCCCTTTTAG 
    TATTATAATA GAAGAACATA TAAAATTTAA ATAAATATAA ATTAAGCCTT 
    ATAAAGGAAG GCTGGGAAGC TGCTGGGCGG TAATAATGGG TCCCTCCCAA 
    AGCAAAACAA AGGAGAGCAA CTCGAATCTG TCTTCTAGAT TATGT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3809 [Map]; Strand: w
      • AT1G01010.1 - [+] show detail - NAC domain containing protein 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16624 - 3-prime edge 
    TGAAACGGTA GAGGTTTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAC 
    CAACGAGCTC CTCGTCGTTC GGACGGAACC CAAACCCAAC TTGATCCTCC 
    ATTTTCACTA AACCGTCCGA TTTCAATGGT TTCCGGGTAA AGAGCTTCGC 
    CGTCGATCTC TCTCGCTCTC TGTAATCTGT ATTTCTCCGA TTATGTATTT 
    GTTTTCTCTG GTTTGGTATA TCTAATAATT TGGAGGGAGG AAGACAGTGA 
    AGTCAGCGTT TAAATAAGAC AATTTATTCC TTTTATTTTT ATTTTCTTAA 
    TTAAATTAAT ATGGATCTCC GGTTTAATTG GTATGGTTTT ACCGGTCCTA 
    ACAATTTTAA AGATTATTAA AACAATTGAT GGTATGAAAT TTCATGTAGT 
    AAACCGAGTA GTATTAACTA TTAAGATTTA TTAGTCTTAA TCATATTATT 
    TTTTACTTAT GATGGTTTAG AATTTTAATC AATGTAAGTA AACAGAGTTC 
    AGATTTAAAC CAATTTAACA ATTAAAAAAG ATTTAATAAT AAATTTTATA 
    AAATCGGTTT GGGTGAACCG TGGATTGAAT ATCATCCTCT GTAGAAATTT 
    GTATTCCCCT TTTAGTATTA TAATAGAAGA ACATATAAAA TTTAAATAAA 
    TATAAATTAA GCCTTATAAA GGAAGGCTGG GAAGCTGCTG GGCGGTAATA 
    ATGGGTCCCT CCCAAAGCAA AACAAAGGAG AGCAACTCGA ATCTGTCTTC 
    TAGATTATGT GTGTGAACAC CCAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3860 [Map]; Strand: w
      • AT1G01010.1 - [+] show detail - NAC domain containing protein 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16624 - 5-prime edge 
    TCCTACTTTC TCCCTGCTCG TTGGTCACTA TCTCCGTAAC AAAATCGAAG 
    GAAACACTAG CCGCGACGTT GAAGTAGCCA TCAGCGAGGT CAACATCTGT 
    AGCTACGATC CTTGGAACTT GCGCTGTAAG TTCCGAATTT TCTGAATTTC 
    ATTTGCAAGT AATCGATTTA GGTTTTTGAT TTTAGGGTTT TTTTTTGTTT 
    TGAACAGTCC AGTCAAAGTA CAAATCGAGA GATGCTATGG GGTACTTCAT 
    CTCACTCGAC

AT1G01010.1

Model type
Protein coding
Short Description
NAC domain containing protein 1
Computational Description
NAC domain containing protein 1 (NAC001); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 69 (TAIR:AT4G01550.1); Has 2503 Blast hits to 2496 proteins in 69 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2502; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR