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GT16632

CSHL Arabidopsis genetrap mutant lines

Original: GT16632

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16632

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2164959 [Map]; Strand: w
      • AT4G04402.1 - [+] show detail - two-component phosphorelay mediator, putative
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT16632 - 3-prime edge 
    ACAACTTCAT CTATCAACAA CACAGAACTT CTGCTACTAC AGAGTATACT 
    TCTTGATTGT TATTAGGATA TAAGCGAGAC ACAAAACATA CCTTGAGCTA 
    CTACCCTTCA ATTAATGCAC ACTCGCACCT ACCTGACCAA AATCTACAGT 
    TCCCGTCGAC TTATCCCTGA GTTATATACA CAAGCAATGA TGATTCTAGC 
    TAGACTTTGT GATTGAGACA CAATCACAGT TTTAAGAAGT TTTAAGACAA 
    CACAAAGCAA TGATGATCTA ACAAAAATTA TGAGTGAGAT AAGAGAAAGA 
    TCGAAAGTTA CAAAGCTCGA GCCATGTTAC TGATAAGCTT AACACAATCT 
    TCAAAGAAAA GAGACAGAAC CTCGGCTACA AAATCAGGGA CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2164954 [Map]; Strand: w
      • AT4G04402.1 - [+] show detail - two-component phosphorelay mediator, putative
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT16632 - 3-prime edge 
    TTCATCTATC AACAACACAG AACTTCTGCT ACTACAGAGT ATACTTCTTG 
    ATTGTTATTA GGATATAAGC GAGACACAAA ACATACCTTG AGCTACTACC 
    CTTCAATTAA TGCACACTCG CACCTACCTG ACCAAAATCT ACAGTTCCCG 
    TCGACTTATC CCTGAGTTAT ATACACAAGC AATGATGATT CTAGCTAGAC 
    TTTGTGATTG AGACACAATC ACAGTTTTAA GAAGTTTTAA GACAACACAA 
    AGCAATGATG ATCTAACAAA AATTATGAGT GAGATAAGAG AAAGATC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2165398 [Map]; Strand: w
      • AT4G04402.1 - [+] show detail - two-component phosphorelay mediator, putative
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: GT16632 - 5-prime edge 
    CTTTCTCCCT GGTTATTGCA GCTTGAGAAA CAAATCATTC AAGCTGGTGG 
    TAGAGTTCCT CAAGTGGATA TTAACTAAAG AGAGACTAAT CCATAAGAAA 
    CAAGATGATG ACTTCAAATT TGGATTGTTC AGTTTCTCCT TTTTAAAATT 
    TATTTTGGAT TTTGGTGTTT TGCTTAAAAA CTCAATAGAA TGTGTGGAAA 
    AAAAGAGACA AGTGATTGTT GTTGATAAAT TAGTAGTGTG TATTGGTTCT 
    TTGATCTTAT TCGAGAAAAT TTAACATCTT TGGACCAAAT TAATGTGATT 
    GATGATATGT TGGTTTTGCT TCTGGTTTTA GTTTGAGTAA GATATAGCAA 
    TTACCAAGTG AGTCTTTTTT GGCTAGTGGT GCTTCTAGGA CTCTCCAAAG 
    GTTGTGGTTT TTAAGATCCT TAGTTCGATT CTCTCTTGGA ATAGGTAGGT 
    ATGTCCATTT TTTCGGATCG CAAATCCGTC CTGACCCGTA TCCGTCCCGA 
    ATTTTTCATC CCATTCAAAT GATTATTTGG TTTGGAACAA TTTTTTTTTT 
    T

AT4G04402.1

Model type
Protein coding
Short Description
two-component phosphorelay mediator, putative
Computational Description
two-component phosphorelay mediator, putative; BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransmitter 2 (TAIR:AT3G29350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR